RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PYGLP06737 847 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 DCNP07585 359 aaKnown RBP10.49□□□□□ -0.73
CHFR-219ENST00000541341 SMIM18P0DKX4 95 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CXCL8P10145 99 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 KCNE1P15382 129 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CDH2P19022 906 aaPredicted RBP10.49□□□□□ -0.73
CHFR-219ENST00000541341 ARL4AP40617 200 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 MAGEA12P43365 314 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ACADSBP45954 432 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CD97P48960 835 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 NPY2RP49146 381 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 GLUD2P49448 558 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 NUDT2P50583 147 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CLCN5P51795 746 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 NAA20P61599 178 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 NTHL1P78549 312 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PCLAFQ15004 111 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PDK1Q15118 436 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 TLR1Q15399 786 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ZBTB6Q15916 424 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PSMD5Q16401 504 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ZBED5Q49AG3 693 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PTPN20Q4JDL3 420 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 SEZ6Q53EL9 994 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PIGGQ5H8A4 983 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 SPOPLQ6IQ16 392 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 C16orf46Q6P387 395 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PRSS55Q6UWB4 352 aaPredicted RBP10.49□□□□□ -0.73
CHFR-219ENST00000541341 LCLAT1Q6UWP7 414 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CDHR3Q6ZTQ4 885 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 GPR141Q7Z602 305 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CAMK1DQ8IU85 385 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 IGDCC3Q8IVU1 814 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ADGRF2Q8IZF7 708 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 WDTC1Q8N5D0 677 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 SMYD1Q8NB12 490 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 DTWD2Q8NBA8 298 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ZFP28Q8NHY6 868 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 GAB3Q8WWW8 586 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 CLPTM1LQ96KA5 538 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ZNF597Q96LX8 424 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 SPATA13Q96N96 652 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 VAT1Q99536 393 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 PAAF1Q9BRP4 392 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 WDR83Q9BRX9 315 aaKnown RBP10.49□□□□□ -0.73
CHFR-219ENST00000541341 TMEM175Q9BSA9 504 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 GPR62Q9BZJ7 368 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 IL22Q9GZX6 179 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 RPF1Q9H9Y2 349 aaKnown RBP10.49□□□□□ -0.73
CHFR-219ENST00000541341 BFARQ9NZS9 450 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 TLK1Q9UKI8 766 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
CHFR-219ENST00000541341 A0A0J9YVX5 310 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 PRSS51A0A1B0GVH4 220 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CAPN8A6NHC0 703 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 BBIP1A8MTZ0 92 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 E5RJQ4 531 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 PROB1E7EW31 1015 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 PTGESO14684 152 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 ITM2AO43736 263 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 NPHS1O60500 1241 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 BANF1O75531 89 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 DNAJB5O75953 348 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 FBXO21O94952 628 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 ADH1AP07327 375 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CDK4P11802 303 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CYP3A5P20815 502 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 IL1R2P27930 398 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 SLC7A1P30825 629 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 ALDH3B2P48448 385 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 WNT7BP56706 349 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 OSTNP61366 133 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 TRIM25Q14258 630 aaKnown RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 DPYSL2Q16555 572 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 SMTNL2Q2TAL5 461 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 ZNF829Q3KNS6 432 aaPredicted RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 C2CD6Q53TS8 623 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 SAMD4BQ5PRF9 694 aaKnown RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 KIAA0319Q5VV43 1072 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 LIPMQ5VYY2 423 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CASC4Q6P4E1 433 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 LPCAT2Q7L5N7 544 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 HPS6Q86YV9 775 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 DSELQ8IZU8 1212 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 DDHD1Q8NEL9 900 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CEP70Q8NHQ1 597 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 ZNF707Q96C28 371 aaPredicted RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 PRR11Q96HE9 360 aaPredicted RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 PPP1R10Q96QC0 940 aaKnown RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 EBF4Q9BQW3 602 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 MECRQ9BV79 373 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CXCL16Q9H2A7 254 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 COG4Q9H9E3 785 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CYP4F11Q9HBI6 524 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 PFDN4Q9NQP4 134 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms