RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ACTN2P35609 894 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 PBX1P40424 430 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ABL2P42684 1182 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 SCNN1BP51168 640 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CLDN2P57739 230 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 DPYSQ14117 519 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 FZD2Q14332 565 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CYTH1Q15438 398 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 NR0B2Q15466 257 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ZSCAN23Q3MJ62 389 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 FAXCQ5TGI0 409 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 HES3Q5TGS1 186 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 MARC1Q5VT66 337 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 POLNQ7Z5Q5 900 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 GKN2Q86XP6 184 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 RAVER1Q8IY67 606 aaKnown RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 SLC25A45Q8N413 288 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF564Q8TBZ8 553 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CPLX3Q8WVH0 158 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 HSPH1Q92598 858 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CELF6Q96J87 481 aaKnown RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 KCTD15Q96SI1 283 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 KLF6Q99612 283 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 FZD3Q9NPG1 666 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CWC15Q9P013 229 aaKnown RBP10.47□□□□□ -0.73
CDCA3-208ENST00000540683 IFNKQ9P0W0 207 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 CTTNBP2NLQ9P2B4 639 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 LHX3Q9UBR4 397 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 FAM208BQ5VWN6 2430 aa10.47□□□□□ -0.73
CDCA3-208ENST00000540683 GOLGA4Q13439 2230 aaKnown RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 LMO7DNF2Z398 122 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 J3KR12 359 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 K7ESM1 405 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 PSMD11O00231 422 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 TNFRSF10CO14798 259 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 FFAR2O15552 330 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 AKR1B10O60218 316 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 MMP20O60882 483 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 TCEA3O75764 348 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 HOXC4P09017 264 aaPredicted RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 RARAP10276 462 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 GKP32189 559 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 MAN1A1P33908 653 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 EIF4A3P38919 411 aaKnown RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 MMP12P39900 470 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 ARHGAP25P42331 645 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 LIG3P49916 1009 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 DNAJC3Q13217 504 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 ARHGEF7Q14155 803 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 SLC18A3Q16572 532 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 ZFYVE27Q5T4F4 411 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 HGSNATQ68CP4 663 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 USP45Q70EL2 814 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 BZW1Q7L1Q6 419 aaKnown RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 CNGA4Q8IV77 575 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 PHACTR4Q8IZ21 702 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 SLC22A18ASQ8N1D0 253 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 DCBLD1Q8N8Z6 715 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 KCTD6Q8NC69 237 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 FATE1Q969F0 183 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 APOLD1Q96LR9 279 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 CCDC42Q96M95 316 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 NUDCD1Q96RS6 583 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF670Q9BS34 389 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 WRAP53Q9BUR4 548 aaKnown RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 POLR1EQ9GZS1 481 aaKnown RBP10.46□□□□□ -0.73
CDCA3-208ENST00000540683 THAP2Q9H0W7 228 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 PCDH12Q9NPG4 1184 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 GPATCH2LQ9NWQ4 482 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 PHTF1Q9UMS5 762 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 CA5BQ9Y2D0 317 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
CDCA3-208ENST00000540683 AKAP13Q12802 2813 aa10.46□□□□□ -0.74
CDCA3-208ENST00000540683 ACACAQ13085 2346 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 A0A087X0T9 212 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 KRT37O76014 449 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 PIGNO95427 931 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 TNFP01375 233 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 FAM228BP0C875 321 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 C6P13671 934 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 ZFXP17010 805 aaPredicted RBP10.45□□□□□ -0.74
CDCA3-208ENST00000540683 CASP14P31944 242 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 MMP13P45452 471 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 HK3P52790 923 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 TARDBPQ13148 414 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDCA3-208ENST00000540683 FGL2Q14314 439 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 NFATC4Q14934 902 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 RTP5Q14D33 572 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 IFI16Q16666 785 aaKnown RBP10.45□□□□□ -0.74
CDCA3-208ENST00000540683 SMTNL2Q2TAL5 461 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 PRRT3Q5FWE3 981 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 CAMK1DQ8IU85 385 aa10.45□□□□□ -0.74
CDCA3-208ENST00000540683 ARHGAP12Q8IWW6 846 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms