RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PEX11AO75192 247 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PSMB9P28065 219 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC15Q0P6D6 951 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 KRT33BQ14525 404 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 GSTA3Q16772 222 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PFKFB4Q16877 469 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 LIMS2Q7Z4I7 341 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 C11orf74Q86VG3 221 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 RELL1Q8IUW5 271 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 ZMIZ2Q8NF64 920 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 OR10T2Q8NGX3 314 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SH3KBP1Q96B97 665 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 P2RY11Q96G91 374 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 EBF4Q9BQW3 602 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 USP29Q9HBJ7 922 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 TBC1D13Q9NVG8 400 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 RCOR3Q9P2K3 495 aaPredicted RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 LGALS13Q9UHV8 139 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SQORQ9Y6N5 450 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SYNCRIPO60506 623 aaKnown RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 VPS26AO75436 327 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 GNRH1P01148 92 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 HSMCR30P0CW71 290 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PPP3CCP48454 512 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 NPY2RP49146 381 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 DGCR6Q14129 220 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PQLC1Q8N2U9 271 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 DCUN1D1Q96GG9 259 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 QKIQ96PU8 341 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SEMA4BQ9NPR2 832 aaPredicted RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 TMLHEQ9NVH6 421 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 SEPT3Q9UH03 358 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 CRLS1Q9UJA2 301 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 PCDHB8Q9UN66 801 aa10.05□□□□□ -0.8
TRAF1-202ENST00000540010 RPL26L1Q9UNX3 145 aaKnown RBP10.05□□□□□ -0.8
TRAF1-202ENST00000540010 C15orf38-AP3S2A0A0A6YYH1 394 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 HACD1B0YJ81 288 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 WFS1O76024 890 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ALDH2P05091 517 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 PIRTP0C851 137 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 MYL4P12829 197 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 VAV1P15498 845 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 VCLP18206 1134 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC10A2Q12908 348 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 MPP2Q14168 576 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 KRT72Q14CN4 511 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 CERCAMQ5T4B2 595 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ARPINQ7Z6K5 226 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 FAM156AQ8NDB6 213 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF296Q8WUU4 475 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 DEFB118Q96PH6 123 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 LENG8Q96PV6 779 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC2A13Q96QE2 648 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 NR1H4Q96RI1 486 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 CINPQ9BW66 212 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 LIMD1Q9UGP4 676 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ZMYND8Q9ULU4 1186 aaPredicted RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC8A2Q9UPR5 921 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SNX10Q9Y5X0 201 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 C9IYK1 514 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 UGT1A9O60656 530 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SIN3BO75182 1162 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 PCNAP12004 261 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 UQCRBP14927 111 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 MPSTP25325 297 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 PIK3R1P27986 724 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 POU1F1P28069 291 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 PEX2P28328 305 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 APLP1P51693 650 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC5A3P53794 718 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 HTRA3P83110 453 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 KLF10Q13118 480 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 LIN52Q52LA3 116 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 DEFB128Q7Z7B8 93 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 FBXO39Q8N4B4 442 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ATG16L2Q8NAA4 619 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 METTL6Q8TCB7 284 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 WDR60Q8WVS4 1066 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 UGT1A7Q9HAW7 530 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 UGT1A10Q9HAW8 530 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 UGT1A8Q9HAW9 530 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 IMPAD1Q9NX62 359 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 MTMR10Q9NXD2 777 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 A0A087WXM4 84 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 CAPN15O75808 1086 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SERPIND1P05546 499 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC2A4P14672 509 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 TYMPP19971 482 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 CCL23P55773 120 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 C21orf59P57076 290 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 DDR2Q16832 855 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms