RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF483Q8TF39 744 aaPredicted RBP17■□□□□ 0.31
COPS3-212ENST00000539941 ITFG2Q969R8 447 aa17■□□□□ 0.31
COPS3-212ENST00000539941 APOPT1Q96IL0 206 aa17■□□□□ 0.31
COPS3-212ENST00000539941 SERAC1Q96JX3 654 aa17■□□□□ 0.31
COPS3-212ENST00000539941 EXOC2Q96KP1 924 aa17■□□□□ 0.31
COPS3-212ENST00000539941 RBBP8Q99708 897 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ADGRE3Q9BY15 652 aa17■□□□□ 0.31
COPS3-212ENST00000539941 OBP2AQ9NY56 170 aa17■□□□□ 0.31
COPS3-212ENST00000539941 GDE1Q9NZC3 331 aa17■□□□□ 0.31
COPS3-212ENST00000539941 INTS6Q9UL03 887 aaKnown RBP17■□□□□ 0.31
COPS3-212ENST00000539941 RAI2Q9Y5P3 530 aa17■□□□□ 0.31
COPS3-212ENST00000539941 PSAT1Q9Y617 370 aa17■□□□□ 0.31
COPS3-212ENST00000539941 HMX2A2RU54 273 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 RFPL1O75677 317 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 ITGA2BP08514 1039 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 TYRP14679 529 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 RIPK1Q13546 671 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 UGP2Q16851 508 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 LY6G5CQ5SRR4 150 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
COPS3-212ENST00000539941 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.99■□□□□ 0.31
COPS3-212ENST00000539941 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.99■□□□□ 0.31
COPS3-212ENST00000539941 BRSK1Q8TDC3 778 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 DYDC1Q8WWB3 177 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 SMARCD2Q92925 531 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 ISG20Q96AZ6 181 aaKnown RBP16.99■□□□□ 0.31
COPS3-212ENST00000539941 ANKRD27Q96NW4 1050 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 LINC00597Q9H2U6 94 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 CPSF2Q9P2I0 782 aaKnown RBP16.99■□□□□ 0.31
COPS3-212ENST00000539941 HS3ST2Q9Y278 367 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 FCF1Q9Y324 198 aaKnown RBP16.99■□□□□ 0.31
COPS3-212ENST00000539941 WNT6Q9Y6F9 365 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 TRANK1O15050 2925 aa16.99■□□□□ 0.31
COPS3-212ENST00000539941 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 TIMM44O43615 452 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 MGRN1O60291 552 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 MT-CO1P00395 513 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 PYGBP11216 843 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 ARNTP27540 789 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 GCKP35557 465 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 HADHAP40939 763 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 LIMK2P53671 638 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 IL9RQ01113 521 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 ACVR1Q04771 509 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 THOC5Q13769 683 aaKnown RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 CNGA3Q16281 694 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 PDCD2Q16342 344 aaPredicted RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 MROH9Q5TGP6 573 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 STRA8Q7Z7C7 330 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 LMNTD2Q8IXW0 634 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 CALML6Q8TD86 181 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 OSCP1Q8WVF1 389 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 ISL2Q96A47 359 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 NSMCE3Q96MG7 304 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 ASB16Q96NS5 453 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 GAS2L1Q99501 681 aaPredicted RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 MCMBPQ9BTE3 642 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 TRPV4Q9HBA0 871 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 IARS2Q9NSE4 1012 aaKnown RBP16.98■□□□□ 0.31
COPS3-212ENST00000539941 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
COPS3-212ENST00000539941 GMNCA6NCL1 334 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 SLC7A4O43246 635 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 LDB2O43679 373 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 VAPBO95292 243 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 ASMTLO95671 621 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 GLP2RO95838 553 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 IGSF6O95976 241 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 PRLP01236 227 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 RPA3P35244 121 aaPredicted RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 ILF2Q12905 390 aaKnown RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 IFT88Q13099 833 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 BMPR2Q13873 1038 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 GALNT3Q14435 633 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 FUT11Q495W5 492 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 ANKRD54Q6NXT1 300 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 KIAA0408Q6ZU52 694 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 KIAA0907Q7Z7F0 614 aaPredicted RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 MGARPQ8TDB4 240 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 CKAP2Q8WWK9 683 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 FGF13Q92913 245 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 AGAP2Q99490 1192 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 CEP44Q9C0F1 390 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 KDM4CQ9H3R0 1056 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 IGFLR1Q9H665 355 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 DUS2Q9NX74 493 aaKnown RBP16.97■□□□□ 0.31
COPS3-212ENST00000539941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■□□□□ 11.3
COPS3-212ENST00000539941 SLC2A6Q9UGQ3 507 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 SLC25A13Q9UJS0 675 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 MYOFQ9NZM1 2061 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 GOLGA8RI6L899 631 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 RFXAPO00287 272 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 COPEO14579 308 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 CRTAMO95727 393 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 ADH1CP00326 375 aa16.97■□□□□ 0.31
COPS3-212ENST00000539941 GSTA1P08263 222 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms