RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 TTPAP49638 278 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 XIAPP98170 497 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 OGFRL1Q5TC84 451 aaPredicted RBP12.89□□□□□ -0.35
CACNB4-210ENST00000539935 TRPV1Q8NER1 839 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
CACNB4-210ENST00000539935 POPDC2Q9HBU9 364 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 ARL5AQ9Y689 179 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 CSF1RP07333 972 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
CACNB4-210ENST00000539935 FBXW8Q8N3Y1 598 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 NELL1Q92832 810 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
CACNB4-210ENST00000539935 TFECO14948 347 aaPredicted RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 MAGEC1O60732 1142 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 DHFRP00374 187 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PPP4CP60510 307 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SLC6A3Q01959 620 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 GCNT1Q02742 428 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ZNF607Q96SK3 696 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SMPD4Q9NXE4 827 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 HOXC6P09630 235 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PTX3P26022 381 aaPredicted RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 GTPBP1O00178 669 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 APOL3O95236 402 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 CBX3Q13185 183 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 UBE2Q1Q7Z7E8 422 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SFRP1Q8N474 314 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ASB7Q9H672 318 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ANKZF1Q9H8Y5 726 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ST3GAL5Q9UNP4 418 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SERPINB7O75635 380 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 HMGCRP04035 888 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PAX7P23759 505 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 INTS7Q9NVH2 962 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PCDHA11Q9Y5I1 949 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 NR1H2P55055 460 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PARP6Q2NL67 630 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 LYPLAL1Q5VWZ2 237 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SUSD6Q92537 303 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 MRPL9Q9BYD2 267 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 AMD1P17707 334 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 AXLP30530 894 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 GRIK4Q16099 956 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SLC15A2Q16348 729 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SAMD7Q7Z3H4 446 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TATDN2Q93075 761 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 PGLYRP2Q96PD5 576 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TTLL2Q9BWV7 592 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 OGDHLQ9ULD0 1010 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
CACNB4-210ENST00000539935 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
CACNB4-210ENST00000539935 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 DPYSL3Q14195 570 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 WDR12Q9GZL7 423 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 TTYH1Q9H313 450 aaPredicted RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 ZDHHC6Q9H6R6 413 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 XPNPEP3Q9NQH7 507 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 ABCC13Q9NSE7 274 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 LDOC1O95751 146 aaPredicted RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 DBTP11182 482 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 RFX4Q33E94 735 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 DNAJB14Q8TBM8 379 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 SLC2A14Q8TDB8 520 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 LMAN2LQ9H0V9 348 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 NECTIN3Q9NQS3 549 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 IRGMA1A4Y4 181 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 CARNS1A5YM72 827 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 PTPN9P43378 593 aa12.87□□□□□ -0.35
CACNB4-210ENST00000539935 RNASE12Q5GAN4 147 aaKnown RBP12.87□□□□□ -0.35
CACNB4-210ENST00000539935 STXBP5Q5T5C0 1151 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms