RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 VPS13AQ96RL7 3174 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 ADAMTS9Q9P2N4 1935 aa12.8□□□□□ -0.36
TSPAN9-207ENST00000539631 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 C5orf60A6NFR6 353 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 NEMP1O14524 444 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 TSPAN6O43657 245 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PRLP01236 227 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 RETP07949 1114 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PRLRP16471 622 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 CTPS1P17812 591 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SUOXP51687 545 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ETF1P62495 437 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 FAM193AP78312 1265 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ELP6Q0PNE2 266 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 WDR45BQ5MNZ6 344 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SEL1L3Q68CR1 1132 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ITPRIPL1Q6GPH6 555 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ERAP2Q6P179 960 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PRELID2Q8N945 189 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ACTRT1Q8TDG2 376 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PIH1D2Q8WWB5 315 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 OXNAD1Q96HP4 312 aaPredicted RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 FEM1CQ96JP0 617 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SPATA13Q96N96 652 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SMIM14Q96QK8 99 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ORAI3Q9BRQ5 295 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 WRAP53Q9BUR4 548 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 MIR1-1HGQ9H1L0 117 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 GBA3Q9H227 469 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 PILRBQ9UKJ0 227 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 ZNF148Q9UQR1 794 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 SLCO1B1Q9Y6L6 691 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 TRPM6Q9BX84 2022 aa12.79□□□□□ -0.36
TSPAN9-207ENST00000539631 A0A1W2PPC4 97 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 A8MX80 341 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 LATO43561 262 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 MMP20O60882 483 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PMPCBO75439 489 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 GCATO75600 419 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 ITGAVP06756 1048 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 ALPIP09923 528 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 ETS1P14921 441 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 CA4P22748 312 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 CD27P26842 260 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PSMB4P28070 264 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 CASQ1P31415 396 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 MMP12P39900 470 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 MPLP40238 635 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 KCNJ1P48048 391 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 RALGDSQ12967 914 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 FGL2Q14314 439 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 GALNT3Q14435 633 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 SLC14A2Q15849 920 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 ZNF284Q2VY69 593 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 KIAA1161Q6NSJ0 714 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 SYT10Q6XYQ8 523 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 KDELC2Q7Z4H8 507 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 SYT12Q8IV01 421 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 LPCAT1Q8NF37 534 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 CAPZA3Q96KX2 299 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 B4GALT6Q9UBX8 382 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 DRG1Q9Y295 367 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PPIL1Q9Y3C6 166 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 PCDHGA5Q9Y5G8 931 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
TSPAN9-207ENST00000539631 A0A0J9YYE9 177 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 NPIPB15A6NHN6 443 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 PATE3B3GLJ2 98 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 WNT9AO14904 365 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 OPHN1O60890 802 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 METTL18O95568 372 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 TRBC1P01850 177 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 STIP1P31948 543 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 VIPR1P32241 457 aa12.77□□□□□ -0.37
TSPAN9-207ENST00000539631 HNF1BP35680 557 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms