RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CFAP52Q8N1V2 620 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PTERQ96BW5 349 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 TBATAQ96M53 351 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 LRGUKQ96M69 825 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 SMOC2Q9H3U7 446 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 CATSPERBQ9H7T0 1116 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 PDP2Q9P2J9 529 aa14.15□□□□□ -0.14
UBE3B-210ENST00000539599 UXTQ9UBK9 157 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-210ENST00000539599 TDRD15B5MCY1 1934 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 APOA4P06727 396 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 CHRM3P20309 590 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 RPL10P27635 214 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 PBX3P40426 434 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 MGAT3Q09327 533 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 PIP4K2CQ8TBX8 421 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 RDH11Q8TC12 318 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 IRGQQ8WZA9 623 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 MRPL57Q9BQC6 102 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 ZDHHC7Q9NXF8 308 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 RRN3Q9NYV6 651 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 TSR3Q9UJK0 312 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 PCDHGA7Q9Y5G6 932 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 NLRC5Q86WI3 1866 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 SCAMP3O14828 347 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 AHCYL1O43865 530 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 H2AFYO75367 372 aaKnown RBP14.14□□□□□ -0.15
UBE3B-210ENST00000539599 AKR1A1P14550 325 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 CAP1Q01518 475 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 TSPY1Q01534 308 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 GPR162Q16538 588 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 UGP2Q16851 508 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 SERINC5Q86VE9 423 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 PGAM4Q8N0Y7 254 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 TRIB2Q92519 343 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 HAPLN3Q96S86 360 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 ZIC5Q96T25 663 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 TRIM4Q9C037 500 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 AP4B1Q9Y6B7 739 aa14.14□□□□□ -0.15
UBE3B-210ENST00000539599 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 PRORSD1PA6NEY8 169 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ACOT8O14734 319 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 TRPA1O75762 1119 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 SMIM18P0DKX4 95 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ME2P23368 584 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ATP5F1P24539 256 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 PSME3P61289 254 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 IRX1P78414 480 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ECT2LQ008S8 904 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ADGRE1Q14246 886 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 MS4A13Q5J8X5 152 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 SIRPB2Q5JXA9 342 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 POTEHQ6S545 545 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 AMIGO2Q86SJ2 522 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 CPSF7Q8N684 471 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 GRIN3AQ8TCU5 1115 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 DNAJC1Q96KC8 554 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 MTG1Q9BT17 334 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 SPATA16Q9BXB7 569 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 UBE2OQ9C0C9 1292 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 RRAGCQ9HB90 399 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 MID2Q9UJV3 735 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 CASQ2O14958 399 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 IPO13O94829 963 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ASGR1P07306 291 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 OR1G1P47890 313 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 SERPINH1P50454 418 aaKnown RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF157P51786 506 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 MLLT6P55198 1093 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 REP15Q6BDI9 236 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 KIAA0930Q6ICG6 404 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 DCBLD1Q8N8Z6 715 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 LRTOMTQ8WZ04 291 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 EFCAB1Q9HAE3 211 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 SP110Q9HB58 689 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-210ENST00000539599 PTPRDP23468 1912 aa14.13□□□□□ -0.15
UBE3B-210ENST00000539599 UGT1A6P19224 532 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 HOXC13P31276 330 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 RGS2P41220 211 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 TUSC3Q13454 348 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 FASTKQ14296 549 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 FAM83EQ2M2I3 478 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 PLA2G4EQ3MJ16 856 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CWF19L1Q69YN2 538 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CILP2Q8IUL8 1156 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 ST13P4Q8IZP2 240 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 PELI3Q8N2H9 469 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 ESAMQ96AP7 390 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 NSMCE3Q96MG7 304 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 GSTO2Q9H4Y5 243 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 NSMCE4AQ9NXX6 385 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 BTRCQ9Y297 605 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 H3BMM5 538 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms