RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 E2F1Q01094 437 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NSUN2Q08J23 767 aaKnown RBP eCLIP19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 KRT81Q14533 505 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PRRT3Q5FWE3 981 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MACC1Q6ZN28 852 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 FAM181AQ8N9Y4 354 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TEKT4Q8WW24 435 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 RFFLQ8WZ73 363 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 SPASTQ9UBP0 616 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 GPSM3Q9Y4H4 160 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CSNK1G3Q9Y6M4 447 aa19.2■□□□□ 0.66
TNFRSF1A-212ENST00000539372 A8MX80 341 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MYO1FO00160 1098 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PCCBP05166 539 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 GJC1P36383 396 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 RENBPP51606 427 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MMRN1Q13201 1228 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ZNF235Q14590 738 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CDKN3Q16667 212 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ZCCHC8Q6NZY4 707 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CPNE8Q86YQ8 564 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ATPAF2Q8N5M1 289 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 BTN2A2Q8WVV5 523 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ECHDC3Q96DC8 303 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NXPE2Q96DL1 559 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ZNF599Q96NL3 588 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PSKH2Q96QS6 385 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 IL12RB2Q99665 862 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LRRC61Q9BV99 259 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 SLC13A1Q9BZW2 595 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NENFQ9UMX5 172 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LHX6Q9UPM6 363 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 OR1A2Q9Y585 309 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 AK5Q9Y6K8 562 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CELSR3Q9NYQ7 3312 aa19.19■□□□□ 0.66
TNFRSF1A-212ENST00000539372 APC2O95996 2303 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TRAFD1O14545 582 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PEX11BO96011 259 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MT-CO3P00414 261 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TPM3P06753 285 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CD48P09326 243 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 DUSP3P51452 185 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ADKP55263 362 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CDH6P55285 790 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 AP1S1P61966 158 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PPARDQ03181 441 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 RALGDSQ12967 914 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 INPP5AQ14642 412 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TCEA2Q15560 299 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NYAP1Q6ZVC0 841 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PGBD5Q8N414 524 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 DCBLD1Q8N8Z6 715 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 IFI44Q8TCB0 444 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 HNRNPLLQ8WVV9 542 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 KNTC1P50748 2209 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LAMA5O15230 3695 aa19.18■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LRRK1Q38SD2 2015 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CPED1A4D0V7 1026 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TOR1BO14657 336 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 OPA1O60313 960 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MAFKO60675 156 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CELA2BP08218 269 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MAXP61244 160 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 GUSBP11Q6P575 273 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ENPP7Q6UWV6 458 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 HID1Q8IV36 788 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PLA2G15Q8NCC3 412 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PDCD6IPQ8WUM4 868 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TSACCQ96A04 125 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 APOOQ9BUR5 198 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PACSIN1Q9BY11 444 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CLPBQ9H078 707 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 USP29Q9HBJ7 922 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 SCUBE2Q9NQ36 999 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 EVA1BQ9NVM1 165 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PCDHGC4Q9Y5F7 938 aa19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ANKRD11Q6UB99 2663 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-212ENST00000539372 MYLKQ15746 1914 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TPP1O14773 563 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ELFN1P0C7U0 828 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 TSHRP16473 764 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 IL4RP24394 825 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 HNRNPH3P31942 346 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 SERPINB6P35237 376 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 PEX5P50542 639 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 POLR2LP62875 67 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NFATC4Q14934 902 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 NR0B2Q15466 257 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 HADHQ16836 314 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ALG11Q2TAA5 492 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 COL28A1Q2UY09 1125 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 ATP13A4Q4VNC1 1196 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 LIPIQ6XZB0 460 aa19.16■□□□□ 0.66
TNFRSF1A-212ENST00000539372 DPPA4Q7L190 304 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms