RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 BCL2L1Q07817 233 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 ELP6Q0PNE2 266 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 ZNF235Q14590 738 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PRKD1Q15139 912 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 BBS12Q6ZW61 710 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 DGLUCYQ7Z3D6 616 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 GLRX5Q86SX6 157 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 SLC22A18ASQ8N1D0 253 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 KIAA1524Q8TCG1 905 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 UBE2Q2Q8WVN8 375 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PIH1D2Q8WWB5 315 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 ALG3Q92685 438 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 KLK6Q92876 244 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 IFT43Q96FT9 208 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 MCCC1Q96RQ3 725 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 TM7SF3Q9NS93 570 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 CA5BQ9Y2D0 317 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PCDHGC4Q9Y5F7 938 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 CCDC66A2RUB6 948 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 KCNK3O14649 394 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 DDX3YO15523 660 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 ARHGAP6O43182 974 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 CST8O60676 142 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 DKK1O94907 266 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 PGLSO95336 258 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 IPO7O95373 1038 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 TGM2P21980 687 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 ZBTB17Q13105 803 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 TFDP2Q14188 446 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 STAT4Q14765 748 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 PDK1Q15118 436 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 LRRC73Q5JTD7 316 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 LIPIQ6XZB0 460 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 KYAT3Q6YP21 454 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 SAP25Q8TEE9 199 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 LRRN4Q8WUT4 740 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 HES6Q96HZ4 224 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 RBM41Q96IZ5 413 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 POLR1EQ9GZS1 481 aaKnown RBP13.8□□□□□ -0.2
CD9-208ENST00000538834 NT5MQ9NPB1 228 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 RBM22Q9NW64 420 aaKnown RBP eCLIP13.8□□□□□ -0.2
CD9-208ENST00000538834 PHTF1Q9UMS5 762 aa13.8□□□□□ -0.2
CD9-208ENST00000538834 TOR1BO14657 336 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 GIPC1O14908 333 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 MMP20O60882 483 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 TM7SF2O76062 418 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 PDHA1P08559 390 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 AKT2P31751 481 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 IGFALSP35858 605 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
CD9-208ENST00000538834 POLR2LP62875 67 aaKnown RBP13.79□□□□□ -0.2
CD9-208ENST00000538834 FOXK2Q01167 660 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 KIF5AQ12840 1032 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SLC14A2Q15849 920 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 TPRG1LQ5T0D9 272 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 RFX6Q8HWS3 928 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 OR13H1Q8NG92 308 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 NSMCE1Q8WV22 266 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SCRN2Q96FV2 425 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 KLHDC7BQ96G42 594 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 FZD3Q9NPG1 666 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 AASDHPPTQ9NRN7 309 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SAE1Q9UBE0 346 aaPredicted RBP13.79□□□□□ -0.2
CD9-208ENST00000538834 PCOLCE2Q9UKZ9 415 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
CD9-208ENST00000538834 SPTY2D1-AS1A0A0U1RR47 76 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 MED19A0JLT2 244 aaPredicted RBP13.78□□□□□ -0.2
CD9-208ENST00000538834 KCNK1O00180 336 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 SH3BP5O60239 455 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 JCHAINP01591 159 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 ADRB1P08588 477 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 THEGLP0DJG4 465 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 GIMD1P0DJR0 217 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 C6P13671 934 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 LIG3P49916 1009 aa13.78□□□□□ -0.2
CD9-208ENST00000538834 C21orf59P57076 290 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms