RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TSTD2Q5T7W7 516 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 POTEHQ6S545 545 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 CYS1Q717R9 158 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 RAB3IL1Q8TBN0 382 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 GDPD5Q8WTR4 605 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF184Q99676 751 aaPredicted RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TM6SF2Q9BZW4 377 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SLC25A51Q9H1U9 297 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 FAM8A1Q9UBU6 413 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 V9GYQ6 96 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 MYO9BQ13459 2157 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TPST1O60507 370 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 RHOBTB1O94844 696 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 SBK3P0C264 359 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ACTR3P61158 418 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ECT2LQ008S8 904 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PLD1Q13393 1074 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 DSC3Q14574 896 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 IHHQ14623 411 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 LBRQ14739 615 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ZRANB3Q5FWF4 1079 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 AGAP9Q5VTM2 703 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF598Q86UK7 904 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 DSELQ8IZU8 1212 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 KYQ8NBH2 561 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PIP4K2CQ8TBX8 421 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 TNFRSF12AQ9NP84 129 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 SEMA4BQ9NPR2 832 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 DNAJC28Q9NX36 388 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 SCOCQ9UIL1 159 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ZFP37Q9Y6Q3 630 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 UBXN8O00124 270 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 MAGEC1O60732 1142 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 GLP2RO95838 553 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 GOT2P00505 430 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 SLC2A3P11169 496 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 XRCC1P18887 633 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CPOXP36551 454 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 KCNC1P48547 511 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PSEN1P49768 467 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CDKN1CP49918 316 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 THOP1P52888 689 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 INHBEP58166 350 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 MAP7D1Q3KQU3 841 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 RANBP10Q6VN20 620 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 COLGALT2Q8IYK4 626 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PGBD5Q8N414 524 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CARNMT1Q8N4J0 409 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ENDOVQ8N8Q3 282 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 TRPC4APQ8TEL6 797 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PPWD1Q96BP3 646 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 KCNA7Q96RP8 456 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PCDHAC1Q9H158 963 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 EBF3Q9H4W6 596 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ATP13A1Q9HD20 1204 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 RAD54BQ9Y620 910 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CCDC162PA2VCL2 907 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 MATN2O00339 956 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 GRID2O43424 1007 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CYP11A1P05108 521 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 THRAP10827 490 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CTPS1P17812 591 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 NELFEP18615 380 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CYP2C18P33260 490 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 DSG1Q02413 1049 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CDK18Q07002 472 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 FUT10Q6P4F1 479 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PTGR2Q8N8N7 351 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 BHLHE22Q8NFJ8 381 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 OR4K2Q8NGD2 314 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 BTN2A3PQ96KV6 586 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 NSUN5Q96P11 429 aaKnown RBP8.75□□□□□ -1.01
UBE3B-208ENST00000538070 DRC3Q9H069 523 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 PRDM16Q9HAZ2 1276 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 NSMCE4AQ9NXX6 385 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 TIMM22Q9Y584 194 aa8.75□□□□□ -1.01
UBE3B-208ENST00000538070 CAPN8A6NHC0 703 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF195O14628 629 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 DNAJA2O60884 412 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 LTA4HP09960 611 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 RHOQP17081 205 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CHRM3P20309 590 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TACR2P21452 398 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CES1P23141 567 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CRABP2P29373 138 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 HOXC8P31273 242 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 HNRNPDQ14103 355 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 BNC2Q6ZN30 1099 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CUZD1Q86UP6 607 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 STYXQ8WUJ0 223 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 WDR41Q9HAD4 459 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 S100A14Q9HCY8 104 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MID1IP1Q9NPA3 183 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 GMPR2Q9P2T1 348 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ADAMTS6Q9UKP5 1117 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms