RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 HNRNPA1L2Q32P51 320 aaKnown RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 NAIF1Q69YI7 327 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 KIAA0930Q6ICG6 404 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 PTCRAQ6ISU1 281 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 RALGPS2Q86X27 583 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 CAMK1DQ8IU85 385 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 SLC44A3Q8N4M1 653 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 EPS8L3Q8TE67 593 aaKnown RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 PDCD6IPQ8WUM4 868 aaKnown RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 CDKL2Q92772 493 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 ECHDC3Q96DC8 303 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 PGM2Q96G03 612 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 CERS2Q96G23 380 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 TRIM56Q9BRZ2 755 aaKnown RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 STMN4Q9H169 189 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 ZDHHC6Q9H6R6 413 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 TMBIM4Q9HC24 238 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 CHRAC1Q9NRG0 131 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 FAM53CQ9NYF3 392 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDB1-209ENST00000537877 VPS18Q9P253 973 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
DDB1-209ENST00000537877 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 LGALS13Q9UHV8 139 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 STARD13Q9Y3M8 1113 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
DDB1-209ENST00000537877 MROH6A6NGR9 719 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 BNIP3LO60238 219 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
DDB1-209ENST00000537877 HNRNPLP14866 589 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDB1-209ENST00000537877 GLULP15104 373 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 NMBRP28336 390 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 SOX9P48436 509 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PDE1BQ01064 536 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 MGAT5Q09328 741 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 KBTBD12Q3ZCT8 623 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TSTD2Q5T7W7 516 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 AGBL2Q5U5Z8 902 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PDPK2PQ6A1A2 396 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TRMT10BQ6PF06 316 aaKnown RBP12.42□□□□□ -0.42
DDB1-209ENST00000537877 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 MARK2Q7KZI7 788 aaKnown RBP12.42□□□□□ -0.42
DDB1-209ENST00000537877 NDUFAF2Q8N183 169 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PAF1Q8N7H5 531 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 BLOC1S5Q8TDH9 187 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PIH1D2Q8WWB5 315 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PTPRN2Q92932 1015 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 VOPP1Q96AW1 172 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 MFSD3Q96ES6 412 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
DDB1-209ENST00000537877 PAFAH2Q99487 392 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TMEM245Q9H330 911 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TRABDQ9H4I3 376 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 SUV39H2Q9H5I1 410 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 TREX1Q9NSU2 369 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 PSMC3IPQ9P2W1 217 aaPredicted RBP12.42□□□□□ -0.42
DDB1-209ENST00000537877 PHTF1Q9UMS5 762 aa12.42□□□□□ -0.42
DDB1-209ENST00000537877 A0A0J9YYE9 177 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 TSPAN11A1L157 253 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 SMIM23A6NLE4 172 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
DDB1-209ENST00000537877 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 RGS16O15492 202 aaPredicted RBP12.41□□□□□ -0.42
DDB1-209ENST00000537877 LDB2O43679 373 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 TRBC1P01850 177 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 UGT2B4P06133 528 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 INHBAP08476 426 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ATP5DP30049 168 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 GKP32189 559 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 GALK1P51570 392 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ACVR1Q04771 509 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ENPP2Q13822 863 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.424e-8■■□□□ 13.2
DDB1-209ENST00000537877 TAF1AQ15573 450 aaPredicted RBP12.41□□□□□ -0.42
DDB1-209ENST00000537877 BRAT1Q6PJG6 821 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 GDPD4Q6W3E5 623 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 GLT6D1Q7Z4J2 308 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 CHST14Q8NCH0 376 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 GABPB2Q8TAK5 448 aaPredicted RBP12.41□□□□□ -0.42
DDB1-209ENST00000537877 HCAR2Q8TDS4 363 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 STYXQ8WUJ0 223 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 SLC44A1Q8WWI5 657 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 OR8D1Q8WZ84 308 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ZNF778Q96MU6 729 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 C19orf43Q9BQ61 176 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 MAGEE1Q9HCI5 957 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 SLC2A4RGQ9NR83 387 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 NSMCE4AQ9NXX6 385 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 EURLQ9NYK6 297 aa12.41□□□□□ -0.42
DDB1-209ENST00000537877 ZFATQ9P243 1243 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms