RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 CAMK2BQ13554 666 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 TRIM14Q14142 442 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 IHHQ14623 411 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 RFTN1Q14699 578 aaPredicted RBP16.51■□□□□ 0.23
ATN1-203ENST00000537488 CFAP58Q5T655 872 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 NCBP2-AS2Q69YL0 99 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 PELI3Q8N2H9 469 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 ATPAF2Q8N5M1 289 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATN1-203ENST00000537488 PLA2G15Q8NCC3 412 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 DENND6BQ8NEG7 585 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 ZNF548Q8NEK5 533 aaPredicted RBP16.51■□□□□ 0.23
ATN1-203ENST00000537488 OR4C6Q8NH72 309 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 HCAR2Q8TDS4 363 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
ATN1-203ENST00000537488 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 NOD2Q9HC29 1040 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 U3KQA8 63 aa16.51■□□□□ 0.23
ATN1-203ENST00000537488 RP1P56715 2156 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 SSU72P8A0A1W2PR75 194 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 TRABD2BA6NFA1 517 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 SRRM3A6NNA2 597 aaPredicted RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 K7ESM1 405 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 GCATO75600 419 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 PCCBP05166 539 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 TMEM253P0C7T8 217 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 NME1P15531 152 aaKnown RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 JUNDP17535 347 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 NSUN2Q08J23 767 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATN1-203ENST00000537488 ELP6Q0PNE2 266 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 SLC10A2Q12908 348 aaPredicted RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 TRAF2Q12933 501 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 ZNF211Q13398 564 aaPredicted RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 ZNF235Q14590 738 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 GRM3Q14832 879 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 HADHQ16836 314 aaKnown RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 DEFB133Q30KQ1 61 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 ANKRD20A8PQ5CZ79 823 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 BRAT1Q6PJG6 821 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 PARGQ86W56 976 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 DCP2Q8IU60 420 aaKnown RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 PQLC3Q8N755 202 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 SLC35G2Q8TBE7 412 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 LMX1AQ8TE12 382 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 PDCD6IPQ8WUM4 868 aaKnown RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 RAPGEF5Q92565 580 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 APOLD1Q96LR9 279 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 NT5MQ9NPB1 228 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 UVRAGQ9P2Y5 699 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 HYOU1Q9Y4L1 999 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 OR1A2Q9Y585 309 aa16.5■□□□□ 0.23
ATN1-203ENST00000537488 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
ATN1-203ENST00000537488 LZTS3O60299 673 aaPredicted RBP16.49■□□□□ 0.23
ATN1-203ENST00000537488 THOP1P52888 689 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 HNRNPKP61978 463 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATN1-203ENST00000537488 DAB2P98082 770 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 GBE1Q04446 702 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 INPP5AQ14642 412 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 LRRC14Q15048 493 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 HES3Q5TGS1 186 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 ERAP2Q6P179 960 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 LIPIQ6XZB0 460 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 ZSCAN30Q86W11 494 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 PAF1Q8N7H5 531 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 FAM174AQ8TBP5 190 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 TSACCQ96A04 125 aaPredicted RBP16.49■□□□□ 0.23
ATN1-203ENST00000537488 IFT43Q96FT9 208 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 MGME1Q9BQP7 344 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 CLPBQ9H078 707 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 SCUBE2Q9NQ36 999 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 ZNHIT6Q9NWK9 470 aaKnown RBP16.49■□□□□ 0.23
ATN1-203ENST00000537488 B4GALT6Q9UBX8 382 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 PCDHGA1Q9Y5H4 931 aa16.49■□□□□ 0.23
ATN1-203ENST00000537488 DMXL2Q8TDJ6 3036 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 AQP9O43315 295 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 HTRA2O43464 458 aaPredicted RBP16.48■□□□□ 0.23
ATN1-203ENST00000537488 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
ATN1-203ENST00000537488 ACP1P24666 158 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 MMP13P45452 471 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 RENBPP51606 427 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 SUOXP51687 545 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 AP1S1P61966 158 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
ATN1-203ENST00000537488 CYP4F3Q08477 520 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 GALNT2Q10471 571 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 PAFAH1B3Q15102 231 aaKnown RBP16.48■□□□□ 0.23
ATN1-203ENST00000537488 DPPA4Q7L190 304 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 PHACTR4Q8IZ21 702 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 GALNT15Q8N3T1 639 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 CCDC42Q96M95 316 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 APOOQ9BUR5 198 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 LRRC61Q9BV99 259 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 NLGN3Q9NZ94 848 aa16.48■□□□□ 0.23
ATN1-203ENST00000537488 ZZEF1O43149 2961 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms