RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 KRT36O76013 467 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 HOXB8P17481 243 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 CR2P20023 1033 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 FDXRP22570 491 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 CCR10P46092 362 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 NAGLUP54802 743 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TIAL1Q01085 375 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ITKQ08881 620 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 KLF10Q13118 480 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 RFTN1Q14699 578 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 USP41Q3LFD5 358 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 HECTD2Q5U5R9 776 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ANKRD33Q7Z3H0 272 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 FAM161BQ96MY7 647 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 PSKH2Q96QS6 385 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 POPDC3Q9HBV1 291 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 MARCH4Q9P2E8 410 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ZDHHC2Q9UIJ5 367 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 STOML2Q9UJZ1 356 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 MEI4A8MW99 385 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 COCHO43405 550 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 FKTNO75072 461 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TFEBP19484 476 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 SAT1P21673 171 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 MAP2K2P36507 400 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 NFKB2Q00653 900 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 GALNT1Q10472 559 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 HERC3Q15034 1050 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ACAP2Q15057 778 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 RCN1Q15293 331 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 FAM83EQ2M2I3 478 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TYSND1Q2T9J0 566 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 CFAP157Q5JU67 520 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 MAB21L3Q8N8X9 362 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 CCDC126Q96EE4 140 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 NSMCE3Q96MG7 304 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 RTKNQ9BST9 563 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 STOML1Q9UBI4 398 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ZFP37Q9Y6Q3 630 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF106Q9H2Y7 1883 aaKnown RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 A0A0D9SEW6 157 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 GJB5O95377 273 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SEC24AO95486 1093 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 COX4I1P13073 169 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 OGNP20774 298 aaKnown RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF140P52738 457 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 CDKN2DP55273 166 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SATB1Q01826 763 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF235Q14590 738 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SH2D4BQ5SQS7 431 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 AGAP9Q5VTM2 703 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 FAM45BPQ6NSW5 357 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TMEM207Q6UWW9 146 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 FAM45AQ8TCE6 357 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 BRSK1Q8TDC3 778 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 NRG4Q8WWG1 115 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 HDAC10Q969S8 669 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 IGSF21Q96ID5 467 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 NDNQ99608 321 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 OGDHLQ9ULD0 1010 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TBC1D30Q9Y2I9 924 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ILVBLA1L0T0 632 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 A8MT66 165 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 CLDN11O75508 207 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 RPP40O75818 363 aaKnown RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 STC2O76061 302 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 NDST3O95803 873 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ITGAXP20702 1163 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ETFBP38117 255 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SLC11A2P49281 568 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SLC12A2P55011 1212 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 DSG1Q02413 1049 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SLC34A1Q06495 639 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 LSM12Q3MHD2 195 aaKnown RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SETD3Q86TU7 594 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 VWCEQ96DN2 955 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 MOCOSQ96EN8 888 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 CLSTN3Q9BQT9 956 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 POMKQ9H5K3 350 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TRPC7Q9HCX4 862 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 NCKIPSDQ9NZQ3 722 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 KCTD3Q9Y597 815 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 E9PBE3 544 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 DCXO43602 365 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 KLHL41O60662 606 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TBX10O75333 385 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 KLKB1P03952 638 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 RBP1P09455 135 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SP100P23497 879 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ARHGEF6Q15052 776 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms