RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CBWD5Q5RIA9 395 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 FAM83BQ5T0W9 1011 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 WDR73Q6P4I2 378 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 B3GNT6Q6ZMB0 384 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 MOB3CQ70IA8 216 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 WDSUB1Q8N9V3 476 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 TMEM170AQ8WVE7 144 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 RND1Q92730 232 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 DUX3Q96PT4 197 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 SLC32A1Q9H598 525 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 C1RLQ9NZP8 487 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 IFT80Q9P2H3 777 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-208ENST00000537047 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ABHD14A-ACY1A0A1B0GW23 586 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 TYW5A2RUC4 315 aaKnown RBP5.04□□□□□ -1.6
CCDC7-208ENST00000537047 HSPB2A8KAH6 182 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 KLRF2D3W0D1 207 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 EBAG9O00559 213 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 WNT9BO14905 357 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 IFIT2P09913 472 aaKnown RBP5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ZNF883P0CG24 379 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ITGAXP20702 1163 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 TBX4P57082 545 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ERVK11-1P61568 191 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ARHGEF6Q15052 776 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 HSPB2Q16082 182 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ACCSLQ4AC99 568 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ATP13A5Q4VNC0 1218 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 ZNF485Q8NCK3 441 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 MMTAG2Q9BU76 263 aaKnown RBP5.04□□□□□ -1.6
CCDC7-208ENST00000537047 LMAN2LQ9H0V9 348 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 TAAR2Q9P1P5 351 aa5.04□□□□□ -1.6
CCDC7-208ENST00000537047 CBY3A6NI87 242 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 EDIL3O43854 480 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 MCM3P25205 808 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 HNRNPH1P31943 449 aaKnown RBP5.03□□□□□ -1.6
CCDC7-208ENST00000537047 CDKN1AP38936 164 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 SYT16Q17RD7 645 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 TOGARAM2Q6ZUX3 1019 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 PRSS45Q7RTY3 260 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 DGLUCYQ7Z3D6 616 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 BBS10Q8TAM1 723 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 ALG14Q96F25 216 aa5.03□□□□□ -1.6
CCDC7-208ENST00000537047 PLRG1O43660 514 aaKnown RBP5.02□□□□□ -1.61
CCDC7-208ENST00000537047 CDH1P12830 882 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 SRCP12931 536 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 VEGFAP15692 232 aaPredicted RBP5.02□□□□□ -1.61
CCDC7-208ENST00000537047 GOLGA8FQ08AF8 430 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 FOXO1Q12778 655 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 CCDC6Q16204 474 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 CCDC38Q502W7 563 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 PLEKHA7Q6IQ23 1121 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 IL20RBQ6UXL0 311 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 GJC3Q8NFK1 279 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 DBF4BQ8NFT6 615 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 RILPL2Q969X0 211 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 CCDC136Q96JN2 1154 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 TWSG1Q9GZX9 223 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 CISD1Q9NZ45 108 aaKnown RBP5.02□□□□□ -1.61
CCDC7-208ENST00000537047 TCF19Q9Y242 345 aa5.02□□□□□ -1.61
CCDC7-208ENST00000537047 PDS5AQ29RF7 1337 aaKnown RBP5.01□□□□□ -1.61
CCDC7-208ENST00000537047 A0A0U1RQF3 1178 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 EDN2P20800 178 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 ECT2LQ008S8 904 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 RUNX2Q13950 521 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 RUBCNQ92622 972 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 ABCF3Q9NUQ8 709 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 TINAGQ9UJW2 476 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 RALYQ9UKM9 306 aaKnown RBP5.01□□□□□ -1.61
CCDC7-208ENST00000537047 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
CCDC7-208ENST00000537047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5□□□□□ -1.61
CCDC7-208ENST00000537047 TIPRLO75663 272 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 RFPL2O75678 378 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 STX2P32856 288 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 BLMHQ13867 455 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 MMEL1Q495T6 779 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 GFRALQ6UXV0 394 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 NOXA1Q86UR1 476 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 MYPOPQ86VE0 399 aaPredicted RBP5□□□□□ -1.61
CCDC7-208ENST00000537047 FOXRED2Q8IWF2 684 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 DMBX1Q8NFW5 382 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 TAS1R2Q8TE23 839 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 SLC20A1Q8WUM9 679 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 POF1BQ8WVV4 589 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5□□□□□ -1.61
CCDC7-208ENST00000537047 KLHL1Q9NR64 748 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 PCDHGB5Q9Y5G0 923 aa5□□□□□ -1.61
CCDC7-208ENST00000537047 FAM72CH0Y354 149 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 CAPN9O14815 690 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 KLK8O60259 260 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 CEP104O60308 925 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 FAM155BO75949 473 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 CHRM4P08173 479 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 MCM2P49736 904 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 NR0B1P51843 470 aaKnown RBP4.99□□□□□ -1.61
CCDC7-208ENST00000537047 CLDN2P57739 230 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 EDRF1Q3B7T1 1238 aa4.99□□□□□ -1.61
CCDC7-208ENST00000537047 SYCP2LQ5T4T6 812 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms