RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 NME8Q8N427 588 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 LRRC71Q8N4P6 559 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 COLGALT1Q8NBJ5 622 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 XAGE5Q8WWM1 108 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 OVCA2Q8WZ82 227 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 MRPS27Q92552 414 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 RSPRY1Q96DX4 576 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 RRP36Q96EU6 259 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PTCD3Q96EY7 689 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 MCRS1Q96EZ8 462 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 REEP2Q9BRK0 252 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 MECRQ9BV79 373 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 RNF146Q9NTX7 359 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TBCCD1Q9NVR7 557 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CYP39A1Q9NYL5 469 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 DNAJC16Q9Y2G8 782 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 UBE2J1Q9Y385 318 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PCDHB7Q9Y5E2 793 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 NRCAMQ92823 1304 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 MUC22E2RYF6 1773 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 A0A087WV48 116 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 FAM90A20PA6NIJ5 464 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 SLC38A8A6NNN8 435 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 A8MVJ9 347 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ANHXE9PGG2 379 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 STX16-NPEPL1H3BU86 382 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 STX16O14662 325 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ERBB2P04626 1255 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 FESP07332 822 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 HNRNPA1P09651 372 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ZNF286BP0CG31 522 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 EEF2P13639 858 aaKnown RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 CPA1P15085 419 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 CAPN3P20807 821 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 THBS4P35443 961 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 CSRP3P50461 194 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 CLCN2P51788 898 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 NR1H2P55055 460 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 GUCY1B3Q02153 619 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 HTR4Q13639 388 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 MVPQ14764 893 aaKnown RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 LETM2Q2VYF4 491 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ANKRD40Q6AI12 368 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 TCEAL6Q6IPX3 200 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 PCSK4Q6UW60 755 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 C4orf50Q6ZRC1 276 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 MAVSQ7Z434 540 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 TBC1D1Q86TI0 1168 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 THNSL1Q8IYQ7 743 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ZNF276Q8N554 614 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 FSIP1Q8NA03 581 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 DEFB124Q8NES8 71 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 MYCBPAPQ8TBZ2 947 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 SSH3Q8TE77 659 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ST8SIA4Q92187 359 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 TCEAL3Q969E4 200 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 LOXL4Q96JB6 756 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 FAR2Q96K12 515 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 WWC2-AS2Q96NR7 200 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ADAM2Q99965 735 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 SFXN1Q9H9B4 322 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 PREBQ9HCU5 417 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 PARPBPQ9NWS1 579 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 ANKMY1Q9P2S6 941 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 TESQ9UGI8 421 aaKnown RBP4.28□□□□□ -1.72
SNHG1-203ENST00000537024 TBX20Q9UMR3 447 aa4.28□□□□□ -1.72
SNHG1-203ENST00000537024 POLQO75417 2590 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 CLUHO75153 1309 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 WDR81Q562E7 1941 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 MYH4Q9Y623 1939 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 ATG2BQ96BY7 2078 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3DA0A087WVF3 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3IA0A087WXS9 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3EA0A087X179 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3KA0A087X1G2 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 LOC105369274A0A096LPK9 316 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 LOC102723532A0A0G2JNH3 316 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 GXYLT2A0PJZ3 443 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3BA6NDS4 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3FA6NER0 549 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-203ENST00000537024 UNC119BA6NIH7 251 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 SAC3D1A6NKF1 404 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBC1D3LB9A6J9 549 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 H0Y626 953 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 CAPN9O14815 690 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 SPDEFO95238 335 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TRIM16O95361 564 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 TBX18O95935 607 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 ONECUT2O95948 504 aa4.27□□□□□ -1.73
SNHG1-203ENST00000537024 RHOP08100 348 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms