RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 TTC7BQ86TV6 843 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 DENND1CQ8IV53 801 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TMEM151AQ8N4L1 468 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ENDOVQ8N8Q3 282 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 OR6P1Q8NGX9 317 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 KCTD4Q8WVF5 259 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 GPR78Q96P69 363 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TCF12Q99081 682 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TRMOQ9BU70 441 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CCDC28BQ9BUN5 200 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 KLF16Q9BXK1 252 aaPredicted RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 PPP1R12CQ9BZL4 782 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 INTS10Q9NVR2 710 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 SPG21Q9NZD8 308 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 XPR1Q9UBH6 696 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CCDC78A2IDD5 438 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TRPC5OSA6NMA1 111 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 H3BNC9 293 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 MATN2O00339 956 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ZNF195O14628 629 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 INSIG1O15503 277 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ADAM12O43184 909 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 UPP2O95045 317 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ENO1P06733 434 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 PSMA3P25788 255 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SLC6A4P31645 630 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CCNG1P51959 295 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SH2D4BQ5SQS7 431 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SEL1L3Q68CR1 1132 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ACAD11Q709F0 780 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 KDELC2Q7Z4H8 507 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 MFN1Q8IWA4 741 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 EBF4Q9BQW3 602 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 ADGRE3Q9BY15 652 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CD248Q9HCU0 757 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 PNPOQ9NVS9 261 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CPSF2Q9P2I0 782 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 ZNF510Q9Y2H8 683 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 GREB1Q4ZG55 1949 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 TK2O00142 265 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 PRRG1O14668 218 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 CIB2O75838 187 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 PFKLP17858 780 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 PGM1P36871 562 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 ABCG1P45844 678 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 INO80DQ53TQ3 878 aaPredicted RBP13.64□□□□□ -0.23
SMG6-203ENST00000536871 HECTD2Q5U5R9 776 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMG6-203ENST00000536871 TMC7Q7Z402 723 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
SMG6-203ENST00000536871 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
SMG6-203ENST00000536871 CEP97Q8IW35 865 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 ACVR1CQ8NER5 493 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 NXNL1Q96CM4 212 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 RSRC1Q96IZ7 334 aaKnown RBP13.64□□□□□ -0.23
SMG6-203ENST00000536871 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 MIPEPQ99797 713 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 C19orf43Q9BQ61 176 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 COG4Q9H9E3 785 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 GPAMQ9HCL2 828 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
SMG6-203ENST00000536871 TMEM39AQ9NV64 488 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 HACD3Q9P035 362 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 ARMCX1Q9P291 453 aa13.64□□□□□ -0.23
SMG6-203ENST00000536871 CXorf51AA0A1B0GTR3 108 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 GJB5O95377 273 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 SEC24AO95486 1093 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 S1PR4O95977 384 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 CR2P20023 1033 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 NUMBP49757 651 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 COPAP53621 1224 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 TAF1AQ15573 450 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 TRIM60Q495X7 471 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 CNSTQ6PJW8 725 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 TREML1Q86YW5 311 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 HJURPQ8NCD3 748 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 UBXN10Q96LJ8 280 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms