RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 HK3P52790 923 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LVRNQ6Q4G3 990 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PCSK4Q6UW60 755 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 APTXQ7Z2E3 356 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 HID1Q8IV36 788 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CELF6Q96J87 481 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SLC46A1Q96NT5 459 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TUBGCP5Q96RT8 1024 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EIF3CQ99613 913 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CCDC3Q9BQI4 270 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DPH1Q9BZG8 443 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SLC39A8Q9C0K1 460 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GPATCH2LQ9NWQ4 482 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 AP4E1Q9UPM8 1137 aa19.84■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PIEZO2Q9H5I5 2752 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 A0A1W2PNU3 283 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GOLGA6L22H0YM25 854 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EEF2KO00418 725 aaKnown RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 KLK10O43240 276 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 BUB1BO60566 1050 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 RASGRP1O95267 797 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CELA2BP08218 269 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PSMA2P25787 234 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 LIG3P49916 1009 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PAPOLAP51003 745 aaKnown RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 MAMLD1Q13495 774 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SPIDRQ14159 915 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 INPP5AQ14642 412 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 NFATC4Q14934 902 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 AGERQ15109 404 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ALG11Q2TAA5 492 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ENPP7Q6UWV6 458 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 RD3Q7Z3Z2 195 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 IRF2BP2Q7Z5L9 587 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CAMK1DQ8IU85 385 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 SDR16C5Q8N3Y7 309 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ARL10Q8N8L6 244 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ATL2Q8NHH9 583 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TSACCQ96A04 125 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 APOOQ9BUR5 198 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EDEM3Q9BZQ6 932 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DHX35Q9H5Z1 703 aaKnown RBP19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PARVAQ9NVD7 372 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TAS2R14Q9NYV8 317 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GULP1Q9UBP9 304 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ATP8A1Q9Y2Q0 1164 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PCDHGA8Q9Y5G5 932 aa19.83■□□□□ 0.77
TNFRSF1B-204ENST00000536782 TMCO5BA8MYB1 307 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 DAPK3O43293 454 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PALMO75781 387 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 MMP12P39900 470 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CSNK1DP48730 415 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SRP54P61011 504 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NCAPHQ15003 741 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ERMARDQ5T6L9 678 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 FOXR1Q6PIV2 292 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SRLQ86TD4 932 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 GKN2Q86XP6 184 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 WDR36Q8NI36 951 aaKnown RBP19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PCDH19Q8TAB3 1148 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 HSD3B7Q9H2F3 369 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ATP13A3Q9H7F0 1226 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SYNDIG1Q9H7V2 258 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CPNE5Q9HCH3 593 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SIRPGQ9P1W8 387 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 KLQ9UEF7 1012 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 MYO6Q9UM54 1294 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 OR1A2Q9Y585 309 aa19.82■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ERVH48-1M5A8F1 160 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PCCBP05166 539 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SERPINA4P29622 427 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RGRP47804 291 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 MTM1Q13496 603 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CA9Q16790 459 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ARHGAP40Q5TG30 622 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PLEKHA7Q6IQ23 1121 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RFX8Q6ZV50 586 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ZSWIM9Q86XI8 627 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ARL14Q8N4G2 192 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 KYQ8NBH2 561 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 TSEN2Q8NCE0 465 aaKnown RBP19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CCDC97Q96F63 343 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PRR11Q96HE9 360 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 WDR92Q96MX6 357 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 SYT11Q9BT88 431 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PCSK1NQ9UHG2 260 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 GPR34Q9UPC5 381 aa19.81■□□□□ 0.76
TNFRSF1B-204ENST00000536782 LRP4O75096 1905 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CCDC187A0A096LP49 1063 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CFAP69A5D8W1 941 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 NTN3O00634 580 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 CASC3O15234 703 aaKnown RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ATMINO43313 823 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RNF8O76064 485 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ZIC2O95409 532 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PRKCGP05129 697 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 ATP1A3P13637 1013 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 MLLT3P42568 568 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 PDX1P52945 283 aa19.8■□□□□ 0.76
TNFRSF1B-204ENST00000536782 RHDQ02161 417 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms