RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZG16BQ96DA0 208 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 PRSS22Q9GZN4 317 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TKTL2Q9H0I9 626 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 RANGRFQ9HD47 186 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-208ENST00000536710 NRIP3Q9NQ35 241 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 NKIRAS2Q9NYR9 191 aa5.6□□□□□ -1.51
PRKDC-208ENST00000536710 TTBK1Q5TCY1 1321 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 POLR2AP24928 1970 aaKnown RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 FAM237AA0A1B0GTK4 181 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 TAF4O00268 1085 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 P4HA2O15460 535 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 ZC3H11AO75152 810 aaKnown RBP eCLIP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 NDUFS3O75489 264 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 BEST1O76090 585 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 RGS11O94810 467 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 MYZAPP0CAP1 466 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 EIF2DP41214 584 aaKnown RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 PPP3CCP48454 512 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 CXCR3P49682 368 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 STK4Q13043 487 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 LPIN1Q14693 890 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 INPP5JQ15735 1006 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 EPHA10Q5JZY3 1008 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 CRELD2Q6UXH1 353 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 PALB2Q86YC2 1186 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 KRTAP1-3Q8IUG1 177 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 KDM1BQ8NB78 822 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 TMEM18Q96B42 140 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 FBXL8Q96CD0 374 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 TMEM68Q96MH6 324 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 POLDIP3Q9BY77 421 aaKnown RBP5.59□□□□□ -1.51
PRKDC-208ENST00000536710 NPFFR1Q9GZQ6 430 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 TASP1Q9H6P5 420 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 ANKRD10Q9NXR5 420 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 ABI3Q9P2A4 366 aa5.59□□□□□ -1.51
PRKDC-208ENST00000536710 A0A0G2JK05 382 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 A0A0U1RQF3 1178 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 E5RJQ4 531 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 TLX3O43711 291 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 AKAP8O43823 692 aaKnown RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 OR2C1O95371 312 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 PRR35P0CG20 571 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF182P17025 639 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 KELP23276 732 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SHMT1P34896 483 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 UBA7P41226 1012 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 GALCP54803 685 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SRSF4Q08170 494 aaKnown RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 LRMPQ12912 555 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 MTX1Q13505 466 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 IRF3Q14653 427 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SRSF7Q16629 238 aaKnown RBP eCLIP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SOWAHAQ2M3V2 549 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 Q4G0T1 1027 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 CXorf66Q5JRM2 361 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 PLEKHS1Q5SXH7 462 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 GLDNQ6ZMI3 551 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 DEF8Q6ZN54 512 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 ZBTB2Q8N680 514 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 LSMEM1Q8N8F7 131 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 HUS1BQ8NHY5 278 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SLC35F5Q8WV83 523 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 ARHGEF26Q96DR7 871 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SAT2Q96F10 170 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF570Q96NI8 536 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 GFM1Q96RP9 751 aaKnown RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SLF1Q9BQI6 1058 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
PRKDC-208ENST00000536710 CHORDC1Q9UHD1 332 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-208ENST00000536710 SYNDIG1LA6NDD5 238 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 A8MV72 311 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 A8MZ25 164 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 KLK8O60259 260 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF500O60304 480 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 TMEM11P17152 192 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 CHRNB2P17787 502 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 DCTDP32321 178 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 NNMTP40261 264 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 CALD1Q05682 793 aaKnown RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 FAM27E3Q08E93 113 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 AIMP2Q13155 320 aaKnown RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 NAE1Q13564 534 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 BECN1Q14457 450 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 NAB2Q15742 525 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 RAB41Q5JT25 222 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 KIAA0930Q6ICG6 404 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 QSOX2Q6ZRP7 698 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 SLC35F3Q8IY50 421 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 MB21D2Q8IYB1 491 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 ELMOD3Q96FG2 381 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 VCPIP1Q96JH7 1222 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 SORCS2Q96PQ0 1159 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 SERINC2Q96SA4 455 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 WDR77Q9BQA1 342 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms