RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PAQR9Q6ZVX9 377 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 TMEM126BQ8IUX1 230 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 LILRB4Q8NHJ6 448 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 ZNF597Q96LX8 424 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 C1orf50Q9BV19 199 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 DUSP16Q9BY84 665 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 TP63Q9H3D4 680 aaPredicted RBP14.08□□□□□ -0.15
LIG1-203ENST00000536218 TTLL3Q9Y4R7 772 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 DGKBQ9Y6T7 804 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 M0QYT0 321 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 ASGR1P07306 291 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 SLC10A3P09131 477 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 NPR3P17342 541 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 GRK2P25098 689 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 TKTL1P51854 596 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 CDK18Q07002 472 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 ART3Q13508 389 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 LSM12Q3MHD2 195 aaKnown RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 TMC5Q6UXY8 1006 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 SDR16C5Q8N3Y7 309 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 OR7G1Q8NGA0 311 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 ZBED2Q9BTP6 218 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 RIC8BQ9NVN3 520 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 FBXO9Q9UK97 447 aaPredicted RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 GPSM3Q9Y4H4 160 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 ARL5CA6NH57 179 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 AMHP03971 560 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 ACADSBP45954 432 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 IFRD2Q12894 506 aaPredicted RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 FRA10AC1Q70Z53 315 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 BPHLQ86WA6 291 aaPredicted RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 SUN5Q8TC36 379 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 BHMTQ93088 406 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 HSFY1Q96LI6 401 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 CSPG4P5Q96PW8 444 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 CRTAC1Q9NQ79 661 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 POLE4Q9NR33 117 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 PIH1D1Q9NWS0 290 aaKnown RBP14.08□□□□□ -0.16
LIG1-203ENST00000536218 SEPT3Q9UH03 358 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
LIG1-203ENST00000536218 SAC3D1A6NKF1 404 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 ZNF701M0R085 212 aaPredicted RBP14.07□□□□□ -0.16
LIG1-203ENST00000536218 NRP1O14786 923 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 MDM4O15151 490 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 B3GAT3O94766 335 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 C8BP07358 591 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 IDUAP35475 653 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 GRIA3P42263 894 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 YAP1P46937 504 aaKnown RBP14.07□□□□□ -0.16
LIG1-203ENST00000536218 BFSP2Q13515 415 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 KCNA10Q16322 511 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 AGMOQ6ZNB7 445 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 CLEC20AQ6ZU45 233 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 TOP6BLQ8N6T0 577 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 XPNPEP3Q9NQH7 507 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 MTMR10Q9NXD2 777 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 SEPT10Q9P0V9 454 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 PADI3Q9ULW8 664 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 PRPF19Q9UMS4 504 aaKnown RBP14.07□□□□□ -0.16
LIG1-203ENST00000536218 PTPN2P17706 415 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 CCND3P30281 292 aaPredicted RBP14.07□□□□□ -0.16
LIG1-203ENST00000536218 HPCAL1P37235 193 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 OPRL1P41146 370 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 MATKP42679 507 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 PTPN9P43378 593 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 RAD23AP54725 363 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 CYP2R1Q6VVX0 501 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 KCTD8Q6ZWB6 473 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 ARCQ7LC44 396 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 ANKK1Q8NFD2 765 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 MARK4Q96L34 752 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 LGMNQ99538 433 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 DNAI2Q9GZS0 605 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 TXNDC16Q9P2K2 825 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 ZNF229Q9UJW7 825 aa14.07□□□□□ -0.16
LIG1-203ENST00000536218 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 SNAP91O60641 907 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CYBAP13498 195 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 TGM2P21980 687 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 ARL4AP40617 200 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 BRCC3P46736 316 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CLK3P49761 638 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 MLLT10P55197 1068 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 FCGRTP55899 365 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 GJA9P57773 515 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 IFITM2Q01629 132 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 BSPRYQ5W0U4 402 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 PRR23BQ6ZRT6 265 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CCNYQ8ND76 341 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms