RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 NUDT5Q9UKK9 219 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 SCN10AQ9Y5Y9 1956 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 MYLKQ15746 1914 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 A0A1W2PQH9 124 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 UBDO15205 165 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 MGEA5O60502 916 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 PSME3P61289 254 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 YWHAHQ04917 246 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 ILF2Q12905 390 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 TRIM25Q14258 630 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SQLEQ14534 574 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 ZNF280DQ6N043 979 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 CUZD1Q86UP6 607 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 OR13J1Q8NGT2 312 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 COPS7BQ9H9Q2 264 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 HACD3Q9P035 362 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 PCDHGA7Q9Y5G6 932 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SMIM31A0A1B0GVY4 71 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 MROH6A6NGR9 719 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 PSMD12O00232 456 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 GPC4O75487 556 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 CELF2O95319 508 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 RHOQP17081 205 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 IMPDH1P20839 514 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 INHBCP55103 352 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 DSC3Q14574 896 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 HECTD2Q5U5R9 776 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 PIK3R6Q5UE93 754 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 LILRA2Q8N149 483 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SOCS4Q8WXH5 440 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 TOP1MTQ969P6 601 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 CYP4F12Q9HCS2 524 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 NT5MQ9NPB1 228 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 ADA2Q9NZK5 511 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 CNOT11Q9UKZ1 510 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SARDHQ9UL12 918 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC4A7Q9Y6M7 1214 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 TDRD15B5MCY1 1934 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 NLRC5Q86WI3 1866 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 PATJQ8NI35 1801 aa16.12■□□□□ 0.17
CHMP1A-202ENST00000535997 CENPFP49454 3210 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 C15orf38-AP3S2A0A0A6YYH1 394 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ITGB1P05556 798 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 THPOP40225 353 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 CD86P42081 329 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 HSPA13P48723 471 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 C1QTNF8P60827 252 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ITKQ08881 620 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 LRP8Q14114 963 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 NOMO2Q5JPE7 1267 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ARPINQ7Z6K5 226 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ZYG11BQ9C0D3 744 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 MFSD1Q9H3U5 465 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 EPB41L1Q9H4G0 881 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 TRPC7Q9HCX4 862 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 SUCOQ9UBS9 1254 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 SCML2Q9UQR0 700 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 TRAF6Q9Y4K3 522 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC10A7Q0GE19 358 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 GK5Q6ZS86 529 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 PTAR1Q7Z6K3 402 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 SPATA24Q86W54 205 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ZNF683Q8IZ20 524 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 TEX26Q8N6G2 289 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 OR6P1Q8NGX9 317 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ANKRD49Q8WVL7 239 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 PKP2Q99959 881 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 ADAM2Q99965 735 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 PRDM5Q9NQX1 630 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 TMEM248Q9NWD8 314 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 CACNA2D2Q9NY47 1150 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 FIS1Q9Y3D6 152 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 COMMD3-BMI1R4GMX3 469 aa16.11■□□□□ 0.17
CHMP1A-202ENST00000535997 MIA3Q5JRA6 1907 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 J3KR12 359 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 CRTAMO95727 393 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 S1PR4O95977 384 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 PMLP29590 882 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 GRIA2P42262 883 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 TNK2Q07912 1038 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 TRAP1Q12931 704 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 FASTKQ14296 549 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 ISCA2Q86U28 154 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 SCN4BQ8IWT1 228 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 TRPV1Q8NER1 839 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 PHF21BQ96EK2 531 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 HMCESQ96FZ2 354 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 KLHL32Q96NJ5 620 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 WISP3O95389 354 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 MMP2P08253 660 aa16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 SNRPB2P08579 225 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 TCN1P20061 433 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-202ENST00000535997 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms