RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	IFITM10	A6NMD0	228 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	TSPAN4	O14817	238 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	SLC16A5	O15375	505 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	ZIC3	O60481	467 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	LDB3	O75112	727 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE7	O76087	117 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	POLB	P06746	335 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE12F	P0CL80	117 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE12G	P0CL81	117 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE12I	P0CL82	117 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	IRF1	P10914	325 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	CHAT	P28329	748 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	SSTR2	P30874	369 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	CLDN2	P57739	230 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	VAMP2	P63027	116 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	RPP30	P78346	268 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE1	Q13065	139 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAGE4	Q13068	117 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	SNTA1	Q13424	505 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	PPP2R5B	Q15173	497 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	GPR68	Q15743	365 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	LRRC8E	Q6NSJ5	796 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.21	□□□□□ -1.58	1e-7	■■■■■ 34.2
PRKDC-205	ENST00000535375	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	ZCCHC9	Q8N567	271 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	USP13	Q92995	863 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	ERGIC1	Q969X5	290 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	KIF1BP	Q96EK5	621 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	CISD1	Q9NZ45	108 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	ICAM5	Q9UMF0	924 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	FAM96B	Q9Y3D0	163 aa		5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	ATXN2	Q99700	1313 aa	Known RBP	5.21	□□□□□ -1.58
PRKDC-205	ENST00000535375	CKAP5	Q14008	2032 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	TEX13C	A0A0J9YWL9	993 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	RRN3P2	A6NIE6	340 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	TNPO2	O14787	897 aa	Known RBP	5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	CLGN	O14967	610 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	HSPA12A	O43301	675 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	EIF3J	O75822	258 aa	Known RBP	5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	IGHV4-30-4	P0DP06	118 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	STX2	P32856	288 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	ERVFC1-1	P60608	527 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	PLD5	Q8N7P1	536 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	SCCPDH	Q8NBX0	429 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	FBXL8	Q96CD0	374 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	HVCN1	Q96D96	273 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	DDX31	Q9H8H2	851 aa	Known RBP	5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	VEZT	Q9HBM0	779 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	TBX20	Q9UMR3	447 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	CDC14A	Q9UNH5	594 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	NFE2L3	Q9Y4A8	694 aa		5.2	□□□□□ -1.58
PRKDC-205	ENST00000535375	SAA2-SAA4	A0A096LPE2	208 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	CCDC196	A0A1B0GTZ2	297 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375		A0A1B0GUV1	79 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	WNT9B	O14905	357 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	BCAT2	O15382	392 aa	Predicted RBP	5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	TACC1	O75410	805 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	HEXA	P06865	529 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	SNRNP70	P08621	437 aa	Known RBP	5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	ETFA	P13804	333 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	COX7A2	P14406	83 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	XBP1	P17861	261 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	PAFAH1B1	P43034	410 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	ECT2L	Q008S8	904 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	DLG1	Q12959	904 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	ZNF114	Q8NC26	417 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	CREB3L4	Q8TEY5	395 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	SNAPC3	Q92966	411 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	SCMH1	Q96GD3	660 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	APOPT1	Q96IL0	206 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	ZNF385A	Q96PM9	386 aa	Known RBP	5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	FUZ	Q9BT04	418 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	BPIFA1	Q9NP55	256 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	PPP1R14D	Q9NXH3	145 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	SLCO3A1	Q9UIG8	710 aa		5.19	□□□□□ -1.58
PRKDC-205	ENST00000535375	MAGEA13P	A6NCF6	341 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	TTC36	A6NLP5	189 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	SRRM3	A6NNA2	597 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	TPD52L2	O43399	206 aa	Known RBP	5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	MT-CYB	P00156	380 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	GGT5	P36269	586 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	UFM1	P61960	85 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	TCTN1	Q2MV58	587 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	FAM69B	Q5VUD6	431 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	DLK2	Q6UY11	383 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	EXOC3L1	Q86VI1	746 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	AGBL3	Q8NEM8	1001 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	ZBTB10	Q96DT7	871 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	BICD1	Q96G01	975 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	MPHOSPH8	Q99549	860 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	KXD1	Q9BQD3	176 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	HEMGN	Q9BXL5	484 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	GAREM1	Q9H706	876 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	MAGEE1	Q9HCI5	957 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	C20orf141	Q9NUB4	165 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	SLC9A2	Q9UBY0	812 aa		5.18	□□□□□ -1.58
PRKDC-205	ENST00000535375	RCOR1	Q9UKL0	485 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms