RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RGRP47804 291 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 RPIAP49247 311 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 LIG3P49916 1009 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 PEX5P50542 639 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 RENBPP51606 427 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 ADKP55263 362 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 BCL2L1Q07817 233 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 C1orf61Q13536 156 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 DPYSQ14117 519 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 ATL2Q8NHH9 583 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 FGF11Q92914 225 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 TCEAL2Q9H3H9 227 aaPredicted RBP16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 SEPT3Q9UH03 358 aa16.31■□□□□ 0.2
CLSTN3-204ENST00000535313 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SYCE3A1L190 88 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 LMO7DNF2Z398 122 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 TLX3O43711 291 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 CSO75390 466 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 PRKCGP05129 697 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SCNN1BP51168 640 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 POLR2LP62875 67 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 FANCCQ00597 558 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 PIGHQ14442 188 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 DPYSL2Q16555 572 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SMTNL2Q2TAL5 461 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 FSTL5Q8N475 847 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 TPCN2Q8NHX9 752 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SNIP1Q8TAD8 396 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SCG3Q8WXD2 468 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 HSPH1Q92598 858 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 ZNF599Q96NL3 588 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 CBX8Q9HC52 389 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 PCDHB1Q9Y5F3 818 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 IGSF10Q6WRI0 2623 aa16.3■□□□□ 0.2
CLSTN3-204ENST00000535313 ASXL3Q9C0F0 2248 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 PCCBP05166 539 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 CTSEP14091 401 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 TSHRP16473 764 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 IL1R2P27930 398 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 HK3P52790 923 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 UBASH3AP57075 661 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 AP1S1P61966 158 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 INPP5AQ14642 412 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 NFATC4Q14934 902 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 AGERQ15109 404 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 ELOCQ15369 112 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 C6orf132Q5T0Z8 1188 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 ESRP1Q6NXG1 681 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 LUZP1Q86V48 1076 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 HID1Q8IV36 788 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 NAT6Q93015 286 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 ECHDC3Q96DC8 303 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 PSKH2Q96QS6 385 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 APOOQ9BUR5 198 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 BOCQ9BWV1 1114 aa16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 PNMA8BQ9ULN7 279 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-204ENST00000535313 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 GOLGA6L19H0YKK7 550 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 MUSKO15146 869 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 YY2O15391 372 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 USP12O75317 370 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 RASGRP1O95267 797 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 SERPING1P05155 500 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 ALPIP09923 528 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 ELFN1P0C7U0 828 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 AMPD1P23109 780 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 MTM1Q13496 603 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 ZNF235Q14590 738 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 TBC1D25Q3MII6 688 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 RD3Q7Z3Z2 195 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 POLNQ7Z5Q5 900 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 SLC35F3Q8IY50 421 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 LSMEM2Q8N112 164 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 NSMCE1Q8WV22 266 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 TSACCQ96A04 125 aaPredicted RBP16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 THAP2Q9H0W7 228 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms