RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CCR3	P51677	355 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SEC13	P55735	322 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FUT2	Q10981	343 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PRSS55	Q6UWB4	352 aa	Predicted RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TMC5	Q6UXY8	1006 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ECHDC2	Q86YB7	292 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FUBP3	Q96I24	572 aa	Known RBP eCLIP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SHD	Q96IW2	340 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NDN	Q99608	321 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MAGEH1	Q9H213	219 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NEK6	Q9HC98	313 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RAI2	Q9Y5P3	530 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF780B	Q9Y6R6	833 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532		H3BNH8	94 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ERAL1	O75616	437 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FEN1	P39748	380 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RFWD3	Q6PCD5	774 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	P2RY11	Q96G91	374 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MRPL57	Q9BQC6	102 aa	Known RBP	15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	HEPH	Q9BQS7	1158 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CEP44	Q9C0F1	390 aa		15.81	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GTPBP1	O00178	669 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KRT75	O95678	551 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SOX6	P35712	828 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PTPN20	Q4JDL3	420 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF618	Q5T7W0	954 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AP2M1	Q96CW1	435 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CNBD2	Q96M20	576 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EBNA1BP2	Q99848	306 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MRTO4	Q9UKD2	239 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RHPN2P1	A8MT19	583 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	BTNL10	A8MVZ5	291 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MAPKAPK2	P49137	400 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ANKS1B	Q7Z6G8	1248 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	WFIKKN2	Q8TEU8	576 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CD101	Q93033	1021 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	POLR1B	Q9H9Y6	1135 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PRMT5	O14744	637 aa	Predicted RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FFAR3	O14843	346 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GPR42	O15529	346 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PFKM	P08237	780 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	WARS	P23381	471 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RFC2	P35250	354 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NAGLU	P54802	743 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GNA12	Q03113	381 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RCN1	Q15293	331 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LINGO1	Q96FE5	620 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCED1B	Q96HM7	432 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCDHB1	Q9Y5F3	818 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TMEM191C	A6NGB0	347 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC25A12	O75746	678 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C22orf31	O95567	290 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C4BPA	P04003	597 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NTRK1	P04629	796 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PSMC3	P17980	439 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SPAM1	P38567	509 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SF1	Q15637	639 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GPRIN3	Q6ZVF9	776 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EPHX4	Q8IUS5	362 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	JOSD2	Q8TAC2	188 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC22A17	Q8WUG5	538 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	METTL21A	Q8WXB1	218 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	EPB41L4B	Q9H329	900 aa		15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PPIE	Q9UNP9	301 aa	Known RBP	15.8	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SNUPN	O95149	360 aa	Known RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NDST3	O95803	873 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DSG1	Q02413	1049 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SPDYC	Q5MJ68	293 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SAMD4B	Q5PRF9	694 aa	Known RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FAM83D	Q9H4H8	585 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CORO2B	Q9UQ03	480 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RICTOR	Q6R327	1708 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RGS5	O15539	181 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FKBP6	O75344	327 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LDLR	P01130	860 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ACADS	P16219	412 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AKT2	P31751	481 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TEX44	Q53QW1	395 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	UBE2R2	Q712K3	238 aa	Predicted RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC26A9	Q7LBE3	791 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NRSN1	Q8IZ57	195 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AIF1L	Q9BQI0	150 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ROGDI	Q9GZN7	287 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	L1RE1	Q9UN81	338 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ACTL7B	Q9Y614	415 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ASL	P04424	464 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MMP8	P22894	467 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PTPN4	P29074	926 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AP1S1	P61966	158 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	IL5RA	Q01344	420 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LSM12	Q3MHD2	195 aa	Known RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TAPT1	Q6NXT6	567 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	C16orf46	Q6P387	395 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ADGRG2	Q8IZP9	1017 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GPR156	Q8NFN8	814 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ACMSD	Q8TDX5	336 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CENPT	Q96BT3	561 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF711	Q9Y462	761 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	BLK	P51451	505 aa		15.79	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms