RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ZSCAN25Q6NSZ9 544 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 LVRNQ6Q4G3 990 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CRTC1Q6UUV9 634 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 RBM44Q6ZP01 1051 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 FAM57BQ71RH2 274 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 BHLHA9Q7RTU4 235 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 IRF2BP2Q7Z5L9 587 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 PHLDB2Q86SQ0 1253 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF554Q86TJ5 538 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 DCLK2Q8N568 766 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SCAIQ8N9R8 606 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CNNM3Q8NE01 707 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 OR52L2PQ8NGH6 319 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CFAP61Q8NHU2 1237 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 GSDMBQ8TAX9 411 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SKA1Q96BD8 255 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ERP27Q96DN0 273 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 LRRC46Q96FV0 321 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 C8orf48Q96LL4 319 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 JAKMIP1Q96N16 626 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 UQCC2Q9BRT2 126 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TUBB6Q9BUF5 446 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SARGQ9BW04 601 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SPZ1Q9BXG8 430 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TRIM2Q9C040 744 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 XPO4Q9C0E2 1151 aaKnown RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 VCXQ9H320 206 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 EBF3Q9H4W6 596 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 DCTPP1Q9H773 170 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TMEM184CQ9NVA4 438 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 CA14Q9ULX7 337 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 HEMK1Q9Y5R4 338 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-219ENST00000534049 OVOS2A0A0J9YW53 1432 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 TNS2Q63HR2 1409 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 OVOS2Q6IE36 1432 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 ACEP12821 1306 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 PAPPAQ13219 1627 aa4.43□□□□□ -1.7
ITGB1-219ENST00000534049 A0A087WZ62 844 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GPR75-ASB3A0A0A6YYF3 556 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 LINC00854A0A1B0GVQ3 168 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GTPBP10A4D1E9 387 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 C2CD4BA6NLJ0 364 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 C2orf81A6NN90 581 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 HNRNPCL2B2RXH8 293 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SPECC1L-ADORA2AF8WAN1 911 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 APOL1O14791 398 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 HNRNPCL1O60812 293 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 TACC1O75410 805 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SGPL1O95470 568 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 VIPP01282 170 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 MBPP02686 304 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 EGR1P18146 543 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 PBX1P40424 430 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GSTM5P46439 218 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 STT3AP46977 705 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 AARSP49588 968 aaKnown RBP eCLIP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 CCNG1P51959 295 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 TRAP1Q12931 704 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 MRPL28Q13084 256 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SEMA3BQ13214 749 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 RRAGBQ5VZM2 374 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 FAM90A2PQ658T7 463 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 C3orf62Q6ZUJ4 267 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 RUFY3Q7L099 469 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 KRT27Q7Z3Y8 459 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 DPP9Q86TI2 863 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GRAMD2AQ8IUY3 354 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC28AQ8IWP9 274 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 C17orf53Q8N3J3 647 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 PAF1Q8N7H5 531 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 RNF152Q8N8N0 203 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC89Q8N998 374 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SPERTQ8NA61 448 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 DEPTORQ8TB45 409 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 BRSK1Q8TDC3 778 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF75CPQ92670 426 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SDCCAG3Q96C92 435 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GRAMD1AQ96CP6 724 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ABHD8Q96I13 439 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 MPHOSPH8Q99549 860 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 NAA15Q9BXJ9 866 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 YIPF3Q9GZM5 350 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 DNAI2Q9GZS0 605 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ZCCHC17Q9NP64 241 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ZBTB40Q9NUA8 1239 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SEPT11Q9NVA2 429 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 TMEM45AQ9NWC5 275 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 IL1RAPL1Q9NZN1 696 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 SUCLA2Q9P2R7 463 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 HEY2Q9UBP5 337 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ATPIF1Q9UII2 106 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms