RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 DYRK4Q9NR20 520 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 RNF14Q9UBS8 474 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 A0A1W2PQ67 120 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 UPK3BL1B0FP48 263 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 UPK3BL2E5RIL1 263 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 PHF2O75151 1096 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 METTL18O95568 372 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 SEMA4FO95754 770 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 COILP38432 576 aaPredicted RBP12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 NBL1P41271 181 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 SUOXP51687 545 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 FBXL19Q6PCT2 694 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 TTC7BQ86TV6 843 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 SLC41A1Q8IVJ1 513 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 CADM4Q8NFZ8 388 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 OR14C36Q8NHC7 312 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 FUT8Q9BYC5 575 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 RAPGEFL1Q9UHV5 662 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 CHKBQ9Y259 395 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 NEU2Q9Y3R4 380 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 PCDHB9Q9Y5E1 797 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 ABCA7Q8IZY2 2146 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 LOC285095A0A1B0GVY8 99 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PRKCGP05129 697 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ZSCAN5DPP0CG00 497 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PSMB4P28070 264 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 CCDC15Q0P6D6 951 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 SIM2Q14190 667 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 LRRC73Q5JTD7 316 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ZC3H14Q6PJT7 736 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PCED1AQ9H1Q7 454 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PCDH12Q9NPG4 1184 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 VPS45Q9NRW7 570 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 PHTF1Q9UMS5 762 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 ITM2BQ9Y287 266 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
RPUSD4-208ENST00000533628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 METTL12A8MUP2 240 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 RPL22P35268 128 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 RPL26P61254 145 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 RALGDSQ12967 914 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PTPRRQ15256 657 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 KCTD19Q17RG1 926 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 SPDYCQ5MJ68 293 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 KCTD11Q693B1 232 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 SMIM14Q96QK8 99 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 MCCC1Q96RQ3 725 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 ORAI3Q9BRQ5 295 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PREBQ9HCU5 417 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 RPL26L1Q9UNX3 145 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 ZFR2Q9UPR6 939 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 TNRC6BQ9UPQ9 1833 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 H3BQF6 201 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 MAP2K7O14733 419 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 NDUFS2O75306 463 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PMPCBO75439 489 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 EPOP01588 193 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 ADRA1AP35348 466 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 FNTAP49354 379 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 CCR5P51681 352 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 WNT3AP56704 352 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PPP2CBP62714 309 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 PPP2CAP67775 309 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 CDK18Q07002 472 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 MPP3Q13368 585 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 QPCTQ16769 361 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 KIAA0895LQ68EN5 471 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 CCDC137Q6PK04 289 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-208ENST00000533628 CEP68Q76N32 757 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms