RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 LYSMD2Q8IV50 215 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 LRRC71Q8N4P6 559 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 PDPRQ8NCN5 879 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RFWD2Q8NHY2 731 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 NCOA7Q8NI08 942 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 WDR48Q8TAF3 677 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TRIB2Q92519 343 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TSR2Q969E8 191 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 TUBGCP3Q96CW5 907 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TXNDC15Q96J42 360 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 B3GALT6Q96L58 329 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CNOT6LQ96LI5 555 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 KRT12Q99456 494 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CCM2Q9BSQ5 444 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 TEKT3Q9BXF9 490 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 MROQ9BYG7 248 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ASPSCR1Q9BZE9 553 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 EPC1Q9H2F5 836 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CUEDC2Q9H467 287 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 RMND5AQ9H871 391 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 CAB39LQ9H9S4 337 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 LY9Q9HBG7 655 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 MAGEE1Q9HCI5 957 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 S100A14Q9HCY8 104 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 PNPLA8Q9NP80 782 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 VPS45Q9NRW7 570 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 GLRX2Q9NS18 164 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 HOMER2Q9NSB8 354 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 C20orf96Q9NUD7 363 aaPredicted RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-236ENST00000533222 NCKIPSDQ9NZQ3 722 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 USP36Q9P275 1121 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 TAGLN3Q9UI15 199 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 GLS2Q9UI32 602 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 LNPEPQ9UIQ6 1025 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 PTBP2Q9UKA9 531 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 RCOR1Q9UKL0 485 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ANGPTL2Q9UKU9 493 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 DIMT1Q9UNQ2 313 aaKnown RBP5.57□□□□□ -1.52
CD44-236ENST00000533222 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 SESN1Q9Y6P5 492 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 DIP2AQ14689 1571 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 ATP7AQ04656 1500 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 DUOX2Q9NRD8 1548 aa5.57□□□□□ -1.52
CD44-236ENST00000533222 BIVM-ERCC5R4GMW8 1640 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 A0A0B4J269 797 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 A0A0G2JNJ9 132 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 A0A0U1RQJ8 604 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 CCDC78A2IDD5 438 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 ZNF98A6NK75 572 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 H7C0C1 242 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 WRBO00258 174 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 GABRDO14764 452 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 PCDH17O14917 1159 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 SMAD6O43541 496 aaKnown RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 NOBOXO60393 691 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 OPHN1O60890 802 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 CIAO1O76071 339 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 CAPN1P07384 714 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 GALTP07902 379 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 KRT16P08779 473 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 THEGLP0DJG4 465 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 BMP7P18075 431 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 RFC1P35251 1148 aaPredicted RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 POU3F4P49335 361 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 SLC26A2P50443 739 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 ATP12AP54707 1039 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 NR1H2P55055 460 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 KCNJ10P78508 379 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 CDK16Q00536 496 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 DOC2AQ14183 400 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 GCKRQ14397 625 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 POU6F1Q14863 301 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 SLC39A14Q15043 492 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 OXA1LQ15070 435 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 PPA1Q15181 289 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 SF3B4Q15427 424 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-236ENST00000533222 DPYSL2Q16555 572 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 TIGD2Q4W5G0 525 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 LBHQ53QV2 105 aaPredicted RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 KRTCAP3Q53RY4 240 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 EARS2Q5JPH6 523 aaKnown RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 FAM26FQ5R3K3 315 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 NT5DC1Q5TFE4 455 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 FAM205BPQ63HN1 556 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 ERICH5Q6P6B1 374 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 AAGABQ6PD74 315 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 C1orf122Q6ZSJ8 110 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 HTR3DQ70Z44 454 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 ENOSF1Q7L5Y1 443 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 EPM2AIP1Q7L775 607 aaPredicted RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
CD44-236ENST00000533222 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 TDRPQ86YL5 185 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 LRRC34Q8IZ02 419 aa5.56□□□□□ -1.52
CD44-236ENST00000533222 PYROXD2Q8N2H3 581 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms