RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CPNE8Q86YQ8 564 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 NIPA2Q8N8Q9 360 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 FAM181AQ8N9Y4 354 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 ECHDC3Q96DC8 303 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 ZNF641Q96N77 438 aaPredicted RBP19.1■□□□□ 0.65
SSH3-209ENST00000532600 TUBGCP5Q96RT8 1024 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 NCAPGQ9BPX3 1015 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 DEF6Q9H4E7 631 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 DONSONQ9NYP3 566 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 IPO11Q9UI26 975 aaKnown RBP19.1■□□□□ 0.65
SSH3-209ENST00000532600 TTC24A2A3L6 582 aaPredicted RBP19.09■□□□□ 0.65
SSH3-209ENST00000532600 TRAFD1O14545 582 aaPredicted RBP19.09■□□□□ 0.65
SSH3-209ENST00000532600 GCATO75600 419 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 C6P13671 934 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 JUNDP17535 347 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 GM2AP17900 193 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 SUOXP51687 545 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 SLC10A7Q0GE19 358 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 RALGDSQ12967 914 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 GSE1Q14687 1217 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 ACAP1Q15027 740 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 C19orf48Q6RUI8 117 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 PGBD5Q8N414 524 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 DCBLD1Q8N8Z6 715 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 HSPH1Q92598 858 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 CSPG4P5Q96PW8 444 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 NUP85Q9BW27 656 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 ZWILCHQ9H900 591 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 SP110Q9HB58 689 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.09■□□□□ 0.65
SSH3-209ENST00000532600 LRP4O75096 1905 aa19.09■□□□□ 0.65
SSH3-209ENST00000532600 AQP9O43315 295 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 IL4RP24394 825 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 HNF1BP35680 557 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 LIG3P49916 1009 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 ZNF135P52742 658 aaPredicted RBP19.08■□□□□ 0.64
SSH3-209ENST00000532600 YPEL5P62699 121 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 DAB2P98082 770 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 NSUN2Q08J23 767 aaKnown RBP eCLIP19.08■□□□□ 0.64
SSH3-209ENST00000532600 ELP6Q0PNE2 266 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 GRM3Q14832 879 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 BOLA3Q53S33 107 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 CDCP2Q5VXM1 449 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 KCTD16Q68DU8 428 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 BRAT1Q6PJG6 821 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 CACTIN-AS1Q8N1I8 211 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 FUBP1Q96AE4 644 aaKnown RBP19.08■□□□□ 0.64
SSH3-209ENST00000532600 LRRC61Q9BV99 259 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 CINPQ9BW66 212 aaPredicted RBP19.08■□□□□ 0.64
SSH3-209ENST00000532600 CLPBQ9H078 707 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 PCDH18Q9HCL0 1135 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 ATP8A1Q9Y2Q0 1164 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 REXO2Q9Y3B8 237 aaKnown RBP19.08■□□□□ 0.64
SSH3-209ENST00000532600 CSNK1G3Q9Y6M4 447 aa19.08■□□□□ 0.64
SSH3-209ENST00000532600 ASXL3Q9C0F0 2248 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 NEMP2A6NFY4 417 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 H3BRJ5 948 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 CASC3O15234 703 aaKnown RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 LCA5LO95447 670 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 CELA2BP08218 269 aaPredicted RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 CR2P20023 1033 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 C1orf61Q13536 156 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 PIGHQ14442 188 aaPredicted RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 RFTN1Q14699 578 aaPredicted RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 LBRQ14739 615 aaKnown RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 AGERQ15109 404 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 DEFB133Q30KQ1 61 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 MACC1Q6ZN28 852 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 TMTC1Q8IUR5 882 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 PHACTR4Q8IZ21 702 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 LZTR1Q8N653 840 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 LMX1AQ8TE12 382 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 TEKT4Q8WW24 435 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 PSKH2Q96QS6 385 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 BAG1Q99933 345 aaPredicted RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 ATP13A3Q9H7F0 1226 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 ANAPC7Q9UJX3 599 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 TFR2Q9UP52 801 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 LHX6Q9UPM6 363 aa19.07■□□□□ 0.64
SSH3-209ENST00000532600 URB1O60287 2271 aaKnown RBP19.07■□□□□ 0.64
SSH3-209ENST00000532600 H3BM21 787 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 TLX3O43711 291 aaPredicted RBP19.06■□□□□ 0.64
SSH3-209ENST00000532600 OPA1O60313 960 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 MAFKO60675 156 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 MT-CO3P00414 261 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 CD48P09326 243 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 ALPPL2P10696 532 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 XPAP23025 273 aaPredicted RBP19.06■□□□□ 0.64
SSH3-209ENST00000532600 SCNN1BP51168 640 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 ARSEP51690 589 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 THOP1P52888 689 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 RTP5Q14D33 572 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 LRRC14Q15048 493 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 TMCO4Q5TGY1 634 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 CCDC170Q8IYT3 715 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 PLA2G15Q8NCC3 412 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 FAM71BQ8TC56 605 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 ZNF599Q96NL3 588 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 DUSP23Q9BVJ7 150 aa19.06■□□□□ 0.64
SSH3-209ENST00000532600 APOBEC3BQ9UH17 382 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms