RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 EMP3P54852 163 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PEX6Q13608 980 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 FASTKD3Q14CZ7 662 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PLEKHG4Q58EX7 1191 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF697Q5TEC3 545 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LRRC8DQ7L1W4 858 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 HDDC2Q7Z4H3 204 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LUZP2Q86TE4 346 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 RAB43Q86YS6 212 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 DAW1Q8N136 415 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 CBR4Q8N4T8 237 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 METTL25Q8N6Q8 603 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM71DQ8N9W8 422 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LRTOMTQ8WZ04 291 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PIK3R3Q92569 461 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 HSPH1Q92598 858 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 EBF4Q9BQW3 602 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 BDH2Q9BUT1 245 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 C2orf49Q9BVC5 232 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 DHX33Q9H6R0 707 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 AGO3Q9H9G7 860 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MAN1C1Q9NR34 630 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ZMAT5Q9UDW3 170 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PLLPQ9Y342 182 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PCDHB2Q9Y5E7 798 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 CPQQ9Y646 472 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SF3B1O75533 1304 aaKnown RBP eCLIP6.83□□□□□ -1.324e-12■■■■■ 275.7
TGFBR3-209ENST00000532540 E2F8A0AVK6 867 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TRPC5OSA6NMA1 111 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 C12orf71A8MTZ7 269 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LACTBL1A8MY62 500 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 B8ZZF3 427 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 I3L521 148 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ARVCFO00192 962 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TYROBPO43914 113 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LYPLA1O75608 230 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 VAPBO95292 243 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TSHRP16473 764 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 IL4RP24394 825 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SOX11P35716 441 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 OR2B6P58173 313 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MYL6P60660 151 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PLIN5Q00G26 463 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PLCL1Q15111 1095 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SMAD1Q15797 465 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 CDO1Q16878 200 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 UBAP2Q5T6F2 1119 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 UGT3A1Q6NUS8 523 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ENOSF1Q7L5Y1 443 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TMEM40Q8WWA1 233 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 BADQ92934 168 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 KAT5Q92993 513 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ATP6V1E2Q96A05 226 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 NXNL1Q96CM4 212 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ATXN7L3BQ96GX2 97 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TMEM169Q96HH4 297 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PAK5Q9P286 719 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 LZTS3O60299 673 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 BANF1O75531 89 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 C22orf31O95567 290 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NFICP08651 508 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 EDNRBP24530 442 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 GP5P40197 560 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ETV3P41162 512 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NDST2P52849 883 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MAPK12P53778 367 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SNX16P57768 344 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CAMK2BQ13554 666 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 IKBKEQ14164 716 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 AGKQ53H12 422 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CCNYL2Q5T2Q4 361 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TTC23Q5W5X9 447 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM122CQ6P4D5 195 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MPZL3Q6UWV2 235 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 KIAA0408Q6ZU52 694 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC149Q6ZUS6 474 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PGAM4Q8N0Y7 254 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SVOPQ8N4V2 548 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DNAAF3Q8N9W5 541 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SLCO2A1Q92959 643 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HHIPL1Q96JK4 782 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 LENG8Q96PV6 779 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SEPT5Q99719 369 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TOR3AQ9H497 397 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 EXOSC4Q9NPD3 245 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ABI2Q9NYB9 513 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 COG5Q9UP83 839 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NRXN2Q9P2S2 1712 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ISPDA4D126 451 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TMEM191CA6NGB0 347 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ACKR2O00590 384 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TFECO14948 347 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 OGTO15294 1046 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 INPP4BO15327 924 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RFPL2O75678 378 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PDE9AO76083 593 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms