RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TTC30BQ8N4P2 665 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 OR2C3Q8N628 320 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC185Q8N715 623 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 SUMF1Q8NBK3 374 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 CHST14Q8NCH0 376 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZBTB34Q8NCN2 500 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAM156AQ8NDB6 213 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 CHTF18Q8WVB6 975 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 RUBCNQ92622 972 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 HDAC2Q92769 488 aaKnown RBP5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 NTAN1Q96AB6 310 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC74BQ96LY2 380 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 TEKT5Q96M29 485 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZYG11BQ9C0D3 744 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ADAM19Q9H013 955 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 RAB6CQ9H0N0 254 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 THAP2Q9H0W7 228 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 TMEM245Q9H330 911 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 DEF6Q9H4E7 631 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ABHD10Q9NUJ1 306 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ARHGAP20Q9P2F6 1191 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 NCDNQ9UBB6 729 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 OR12D3Q9UGF7 316 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 GMEB2Q9UKD1 530 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 INTS6Q9UL03 887 aaKnown RBP5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 ATXN7L1Q9ULK2 861 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 TBC1D30Q9Y2I9 924 aa5.91□□□□□ -1.46
HMGB1P42-201ENST00000532126 IGLV3-10A0A075B6K4 115 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SSU72P8A0A1W2PR75 194 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRAMEF27A3QJZ7 478 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC35F4A4IF30 521 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 AKR1B15C9JRZ8 316 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 DCLK1O15075 740 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 AP5Z1O43299 807 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 AKR1B10O60218 316 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA12O60330 932 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF217O75362 1048 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 RNF8O76064 485 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 RHOBTB1O94844 696 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 RHOCP08134 193 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SRPRAP08240 638 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SNRPB2P08579 225 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 HLA-EP13747 358 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 GRK2P25098 689 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 NNMTP40261 264 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 P2RY2P41231 377 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 NUMBP49757 651 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF75DP51815 510 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PLK1P53350 603 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 AIF1P55008 147 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 NRG1Q02297 640 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PTSQ03393 145 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SULT2A1Q06520 285 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SCAPQ12770 1279 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 TAF11Q15544 211 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC18A3Q16572 532 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 DBN1Q16643 649 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC122Q5T0U0 273 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 C1QTNF12Q5T7M4 302 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 RWDD4Q6NW29 188 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 TFAP2DQ7Z6R9 452 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SETD3Q86TU7 594 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 KBTBD6Q86V97 674 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PTRH1Q86Y79 214 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 TMPRSS6Q8IU80 811 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 MCATQ8IVS2 390 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 KRT78Q8N1N4 520 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF366Q8N895 744 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 KDM1BQ8NB78 822 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 OR52K2Q8NGK3 314 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 RLN3Q8WXF3 142 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRCCQ92733 491 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 TBC1D31Q96DN5 1066 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 MRGPRX1Q96LB2 322 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC42Q96M95 316 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 NCAPGQ9BPX3 1015 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 FEM1AQ9BSK4 669 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 VPS11Q9H270 941 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 CD248Q9HCU0 757 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 DNAJB12Q9NXW2 375 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 MPP6Q9NZW5 540 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PPARGC1AQ9UBK2 798 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 SUN2Q9UH99 717 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCSK1NQ9UHG2 260 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 VPS28Q9UK41 221 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 ERVW-1Q9UQF0 538 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 GPR52Q9Y2T5 361 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRAF6Q9Y4K3 522 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA9Q9Y5G4 932 aaKnown RBP5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA8Q9Y5G5 932 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA7Q9Y5G6 932 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA6Q9Y5G7 932 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGA3Q9Y5H0 932 aa5.9□□□□□ -1.46
HMGB1P42-201ENST00000532126 OR51B4Q9Y5P0 310 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms