RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LURAP1LQ8IV03 231 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 CCDC117Q8IWD4 279 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 SPAG16Q8N0X2 631 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 CNBD1Q8NA66 436 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 ADAD2Q8NCV1 583 aaKnown RBP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 ZMIZ2Q8NF64 920 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 CADM4Q8NFZ8 388 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 LGALS12Q96DT0 336 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 ZNF583Q96ND8 569 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 C1RLQ9NZP8 487 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 BCCIPQ9P287 314 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 RALYQ9UKM9 306 aaKnown RBP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 KCNK7Q9Y2U2 307 aa4.34□□□□□ -1.71
PTPRK-220ENST00000531466 ATXN2Q99700 1313 aaKnown RBP4.34□□□□□ -1.71
PTPRK-220ENST00000531466 SH2D4BQ5SQS7 431 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 LYG1Q8N1E2 194 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 SGCZQ96LD1 299 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 TRAPPC9Q96Q05 1148 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 TLR8Q9NR97 1041 aaKnown RBP4.33□□□□□ -1.72
PTPRK-220ENST00000531466 NDRG3Q9UGV2 375 aa4.33□□□□□ -1.72
PTPRK-220ENST00000531466 FFAR2O15552 330 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 TUBBP07437 444 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 WEE2P0C1S8 567 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 STX2P32856 288 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 LMO4P61968 165 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 TUBB4BP68371 445 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 LIN54Q6MZP7 749 aa4.32□□□□□ -1.72
PTPRK-220ENST00000531466 IFT80Q9P2H3 777 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-220ENST00000531466 PDS5AQ29RF7 1337 aaKnown RBP4.31□□□□□ -1.72
PTPRK-220ENST00000531466 PLRG1O43660 514 aaKnown RBP4.31□□□□□ -1.72
PTPRK-220ENST00000531466 HNRNPH1P31943 449 aaKnown RBP4.31□□□□□ -1.72
PTPRK-220ENST00000531466 PPM1AP35813 382 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 PITX1P78337 314 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-220ENST00000531466 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 GJB7Q6PEY0 223 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 LCTLQ6UWM7 567 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 GFRALQ6UXV0 394 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 CHD1LQ86WJ1 897 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 DNAAF1Q8NEP3 725 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 OTULINQ96BN8 352 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 ZNF524Q96C55 264 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 EGFL8Q99944 293 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 CHST12Q9NRB3 414 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
PTPRK-220ENST00000531466 GREB1LQ9C091 1923 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-220ENST00000531466 TYW5A2RUC4 315 aaKnown RBP4.3□□□□□ -1.72
PTPRK-220ENST00000531466 DVL1O14640 695 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 PATE4P0C8F1 98 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 NR1D1P20393 614 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 DVL1P1P54792 670 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-220ENST00000531466 PFKFB4Q16877 469 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 SUSD1Q6UWL2 747 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 CEACAM20Q6UY09 585 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 B3GNT6Q6ZMB0 384 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 TMEM219Q86XT9 240 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPRK-220ENST00000531466 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 OR10V1Q8NGI7 309 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 SLC20A1Q8WUM9 679 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 ATOH8Q96SQ7 321 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 MYD88Q99836 296 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 FSD1Q9BTV5 496 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 PLEKHA5Q9HAU0 1116 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
PTPRK-220ENST00000531466 ENTPD7Q9NQZ7 604 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 KLHL42Q9P2K6 505 aa4.3□□□□□ -1.72
PTPRK-220ENST00000531466 FAF1Q9UNN5 650 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-220ENST00000531466 EBAG9O00559 213 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 SEPT4O43236 478 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 ITGA2P17301 1181 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 SRD5A1P18405 259 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 PPP6R3Q5H9R7 873 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-220ENST00000531466 SULT6B1Q6IMI4 303 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 KSR2Q6VAB6 950 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 GDPD5Q8WTR4 605 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 RND1Q92730 232 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
PTPRK-220ENST00000531466 NPLQ9BXD5 320 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-220ENST00000531466 IGKV6D-41A0A0C4DH26 115 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 E7EVH7 732 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 H0Y3Z8 333 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 KRT38O76015 456 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 TMPOP42166 694 aaKnown RBP4.28□□□□□ -1.72
PTPRK-220ENST00000531466 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPRK-220ENST00000531466 SOWAHAQ2M3V2 549 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 STXBP5Q5T5C0 1151 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 KRBA2Q6ZNG9 492 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 SRLQ86TD4 932 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 ZNF527Q8NB42 609 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 LINS1Q8NG48 757 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 HSPH1Q92598 858 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-220ENST00000531466 PKNOX2Q96KN3 472 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 KXD1Q9BQD3 176 aa4.28□□□□□ -1.72
PTPRK-220ENST00000531466 NDUFB4O95168 129 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms