RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RAB6CQ53S08 254 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 ERAP2Q6P179 960 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 BORAQ6PGQ7 559 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 XYLT1Q86Y38 959 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 EMC1Q8N766 993 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 RCBTB1Q8NDN9 531 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 CPA5Q8WXQ8 436 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 SHC3Q92529 594 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM159Q96B96 161 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PGAP3Q96FM1 320 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TIGD1Q96MW7 591 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 TTYH3Q9C0H2 523 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 RAB6CQ9H0N0 254 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 MAGEH1Q9H213 219 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 CYP4F12Q9HCS2 524 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 PPARGC1AQ9UBK2 798 aaKnown RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-206ENST00000531430 DAAM1Q9Y4D1 1078 aa9.32□□□□□ -0.92
NEDD8-206ENST00000531430 FLNCQ14315 2725 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 A0A1W2PQC6 194 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 FAM72CH0Y354 149 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 STMND1H3BQB6 276 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 CACNB4O00305 520 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 B4GAT1O43505 415 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 PLEKP08567 350 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 GP1BBP13224 206 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 RHOQP17081 205 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ADRA1BP35368 520 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 MAPKAPK2P49137 400 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ZFP36L1Q07352 338 aaKnown RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ELP6Q0PNE2 266 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 KCNAB2Q13303 367 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 MORC3Q14149 939 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 C16orf72Q14CZ0 275 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM52BQ4KMG9 183 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 C14orf28Q4W4Y0 310 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 FAM72AQ5TYM5 149 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 KCTD16Q68DU8 428 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 FAM72DQ6L9T8 149 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 SCYL2Q6P3W7 929 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 TMPRSS9Q7Z410 1059 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 SPRED1Q7Z699 444 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 FAM72BQ86X60 149 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 NRSN1Q8IZ57 195 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 PLA2G15Q8NCC3 412 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 MSANTD4Q8NCY6 345 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 GPR156Q8NFN8 814 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 OR56A4Q8NGH8 313 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 CCL4L1Q8NHW4 92 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ZNF564Q8TBZ8 553 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 RXFP2Q8WXD0 754 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 OR1E3Q8WZA6 343 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 NT5C3BQ969T7 300 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 TBC1D31Q96DN5 1066 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 PDXPQ96GD0 296 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM168Q9H0V1 697 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 EPN3Q9H201 632 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 SUV39H2Q9H5I1 410 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 PCDH12Q9NPG4 1184 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 METTL5Q9NRN9 209 aaKnown RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ZNF212Q9UDV6 495 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 APPL1Q9UKG1 709 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
NEDD8-206ENST00000531430 COL27A1Q8IZC6 1860 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-206ENST00000531430 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 CHD5Q8TDI0 1954 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM202A6NGA9 273 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 LRIG2O94898 1065 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 PRKAR1AP10644 381 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 CYP11B1P15538 503 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 CD82P27701 267 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 GABRB2P47870 512 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 MAZP56270 477 aaKnown RBP9.3□□□□□ -0.92
NEDD8-206ENST00000531430 POLE2P56282 527 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 UGP2Q16851 508 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 CERCAMQ5T4B2 595 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 NKAIN2Q5VXU1 208 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 NAA35Q5VZE5 725 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 DENND2CQ68D51 928 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 SPECC1LQ69YQ0 1117 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TRNP1Q6NT89 227 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 OGFOD3Q6PK18 319 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 DTX1Q86Y01 620 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 CACNA2D3Q8IZS8 1091 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 PIAS4Q8N2W9 510 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-206ENST00000531430 NKD1Q969G9 470 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TAAR9Q96RI9 348 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 RBM15Q96T37 977 aaKnown RBP eCLIP9.3□□□□□ -0.928e-6■□□□□ 8.4
NEDD8-206ENST00000531430 FUCA2Q9BTY2 467 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 SLC12A9Q9BXP2 914 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 KLC2Q9H0B6 622 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 LRRC4CQ9HCJ2 640 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM51Q9NW97 253 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM248Q9NWD8 314 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms