RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 TSNARE1Q96NA8 513 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 GORASP1Q9BQQ3 440 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 C20orf96Q9NUD7 363 aaPredicted RBP8.28□□□□□ -1.08
CMTM1-214ENST00000530141 NDFIP2Q9NV92 336 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 ZNF212Q9UDV6 495 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 DCDC2Q9UHG0 476 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 AGO1Q9UL18 857 aaKnown RBP8.28□□□□□ -1.08
CMTM1-214ENST00000530141 TBC1D30Q9Y2I9 924 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 TCAF1Q9Y4C2 921 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 ZFP37Q9Y6Q3 630 aaPredicted RBP8.28□□□□□ -1.08
CMTM1-214ENST00000530141 MIA3Q5JRA6 1907 aa8.28□□□□□ -1.08
CMTM1-214ENST00000530141 CACNA1IQ9P0X4 2223 aa8.27□□□□□ -1.08
CMTM1-214ENST00000530141 CXorf49A8MYA2 514 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 J3KR12 359 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 CLASP2O75122 1294 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 XYLBO75191 536 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 PMPCBO75439 489 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 GSTA1P08263 222 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 IRF1P10914 325 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 HOXB8P17481 243 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 GABRR2P28476 465 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SLC6A4P31645 630 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 RPA3P35244 121 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 MAPK8P45983 427 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SERPINB8P50452 374 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SERPINH1P50454 418 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 LIMK2P53671 638 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 HNRNPH2P55795 449 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 LRRC14Q15048 493 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 MPP7Q5T2T1 576 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 ATG16L1Q676U5 607 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 KIAA0930Q6ICG6 404 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TRMT10BQ6PF06 316 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 LVRNQ6Q4G3 990 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 RANBP10Q6VN20 620 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TMEM184AQ6ZMB5 413 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 CCDC91Q7Z6B0 441 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 FAM217AQ8IXS0 508 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 LRRC34Q8IZ02 419 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 GDAP1Q8TB36 358 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TCP10LQ8TDR4 215 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SCG3Q8WXD2 468 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 ISL2Q96A47 359 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TADA1Q96BN2 335 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 TMA16Q96EY4 203 aaKnown RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 MGME1Q9BQP7 344 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 ACE2Q9BYF1 805 aaPredicted RBP8.27□□□□□ -1.09
CMTM1-214ENST00000530141 PITPNM3Q9BZ71 974 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 MUC3BQ9H195 1237 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 PLAC1Q9HBJ0 212 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 SMYD2Q9NRG4 433 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 RIMKLBQ9ULI2 386 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 GRID1Q9ULK0 1009 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 ANKRD6Q9Y2G4 727 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 STARD13Q9Y3M8 1113 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 CPQQ9Y646 472 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
CMTM1-214ENST00000530141 DOCK8Q8NF50 2099 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 ZCWPW2A0A1B0GU75 182 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 LOC285095A0A1B0GVY8 99 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 C2orf78A6NCI8 922 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 TCP11X1B4DZS4 312 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 H0Y626 953 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 ZNF197O14709 1029 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 KLF11O14901 512 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 BIRC5O15392 142 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 SIN3BO75182 1162 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 USP12O75317 370 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 LUC7L3O95232 432 aaKnown RBP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 MT-CYBP00156 380 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 IL1BP01584 269 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 APOA4P06727 396 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CKMP06732 381 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 ITGA2BP08514 1039 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 SP9P0CG40 484 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 TROVE2P10155 538 aaKnown RBP eCLIP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CREB1P16220 341 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 PTPN2P17706 415 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 ALDH3A1P30838 453 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CD86P42081 329 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 KPNA2P52292 529 aaKnown RBP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CRADDP78560 199 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CDK18Q07002 472 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 NSUN2Q08J23 767 aaKnown RBP eCLIP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 SLC10A7Q0GE19 358 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 SLC12A1Q13621 1099 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 CDH18Q13634 790 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 MPPE1Q53F39 396 aa8.26□□□□□ -1.09
CMTM1-214ENST00000530141 TAF1BQ53T94 588 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-214ENST00000530141 INO80DQ53TQ3 878 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms