RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 ACVR1CQ8NER5 493 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 KCTD4Q8WVF5 259 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.51
CLP1-203ENST00000529430 CCDC126Q96EE4 140 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 ZNF419Q96HQ0 510 aaPredicted RBP11.9□□□□□ -0.51
CLP1-203ENST00000529430 ECSITQ9BQ95 431 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 MRPL57Q9BQC6 102 aaKnown RBP11.9□□□□□ -0.51
CLP1-203ENST00000529430 TRIM4Q9C037 500 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 MRPL46Q9H2W6 279 aaKnown RBP11.9□□□□□ -0.51
CLP1-203ENST00000529430 SPG21Q9NZD8 308 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 INSL6Q9Y581 213 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.51
CLP1-203ENST00000529430 MTMR11A4FU01 709 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 ANKRD33BA6NCL7 494 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 HDAC3O15379 428 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 PHGDHO43175 533 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 SLC7A4O43246 635 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 NPHS1O60500 1241 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 GJB5O95377 273 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 SOD2P04179 222 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 NCF2P19878 526 aaPredicted RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 ARRB2P32121 409 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 CD86P42081 329 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 LEPRP48357 1165 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 RPL14P50914 215 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 DNAJB13P59910 316 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 XIAPP98170 497 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 PCSK7Q16549 785 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 FAM83EQ2M2I3 478 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 MGAT5BQ3V5L5 792 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 RNF220Q5VTB9 566 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 RAP1GAP2Q684P5 730 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 SEL1L3Q68CR1 1132 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 ZNF470Q6ECI4 717 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 KLC3Q6P597 504 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 NAPRTQ6XQN6 538 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 TFAP2DQ7Z6R9 452 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 FSTL5Q8N475 847 aaPredicted RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 SLC25A41Q8N5S1 370 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 PEX13Q92968 403 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 TADA1Q96BN2 335 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 ZNF599Q96NL3 588 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 PANX3Q96QZ0 392 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 THTPAQ9BU02 230 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 RC3H2Q9HBD1 1191 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 SLC2A6Q9UGQ3 507 aa11.89□□□□□ -0.51
CLP1-203ENST00000529430 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.89□□□□□ -0.51
CLP1-203ENST00000529430 PATJQ8NI35 1801 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 J3KR12 359 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 MATN2O00339 956 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 CNTN5O94779 1100 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 EPOP01588 193 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 URODP06132 367 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 LYNP07948 512 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 ZDHHC11BP0C7U3 371 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 HOXB8P17481 243 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 AVPR1AP37288 418 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 USP4Q13107 963 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 SERINC3Q13530 473 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 ALFQ53S48 1182 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 RTP2Q5QGT7 225 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 AGAP9Q5VTM2 703 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 ACAD11Q709F0 780 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 KBTBD2Q8IY47 623 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 CENPLQ8N0S6 344 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 SLC39A11Q8N1S5 342 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 TMEM151AQ8N4L1 468 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 B3GALT6Q96L58 329 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 SEPT5Q99719 369 aaPredicted RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 TCF7L2Q9NQB0 619 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
CLP1-203ENST00000529430 MKI67P46013 3256 aaKnown RBP11.88□□□□□ -0.51
CLP1-203ENST00000529430 LOC285095A0A1B0GVY8 99 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 TK2O00142 265 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 TBC1D4O60343 1298 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 RBP1P09455 135 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 SYN1P17600 705 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 HLA-DPA1P20036 260 aa11.87□□□□□ -0.51
CLP1-203ENST00000529430 TACR2P21452 398 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms