RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 NEU3Q9UQ49 428 aa6.11□□□□□ -1.43
NUP98-215ENST00000529063 HS3ST3A1Q9Y663 406 aa6.11□□□□□ -1.43
NUP98-215ENST00000529063 CSNK1G3Q9Y6M4 447 aa6.11□□□□□ -1.43
NUP98-215ENST00000529063 hCG_2014768A0A024R1R8 64 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 CPED1A4D0V7 1026 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NEMP2A6NFY4 417 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 M0QYT0 321 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 TERTO14746 1132 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 PSMA7O14818 248 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 MUSKO15146 869 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 ARHGAP6O43182 974 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 MED7O43513 233 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 AP1G1O43747 822 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NOBOXO60393 691 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 TCEA3O75764 348 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 ENDOD1O94919 500 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 PNMA6AP0CW24 399 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 SLC9A1P19634 815 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 L1CAMP32004 1257 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 GKP32189 559 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 IGFALSP35858 605 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 RABIFP47224 123 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 CXCR3P49682 368 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SERPINH1P50454 418 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 DUSP3P51452 185 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 CCNHP51946 323 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 RPS21P63220 83 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 KRT83P78385 493 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NFKB2Q00653 900 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 UBAP2LQ14157 1087 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 ARL13BQ3SXY8 428 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 RAB6CQ53S08 254 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 EFHC1Q5JVL4 640 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 KLHL10Q6JEL2 608 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 TRIM65Q6PJ69 517 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 FOXR2Q6PJQ5 311 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 RBM44Q6ZP01 1051 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 BNIPLQ7Z465 357 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SETD3Q86TU7 594 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 DCP2Q8IU60 420 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 ZNF397Q8NF99 534 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 OR6K2Q8NGY2 324 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 LMX1AQ8TE12 382 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NELFBQ8WX92 580 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 GATAD2BQ8WXI9 593 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SHC3Q92529 594 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SMARCE1Q969G3 411 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 ABHD17AQ96GS6 310 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 DHTKD1Q96HY7 919 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 PPP1R13BQ96KQ4 1090 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 CCDC114Q96M63 670 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 LENG8Q96PV6 779 aaPredicted RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 FERD3LQ96RJ6 166 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 TBCBQ99426 244 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 CCDC3Q9BQI4 270 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 GTPBP4Q9BZE4 634 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 TKTL2Q9H0I9 626 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SIK2Q9H0K1 926 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 RAB6CQ9H0N0 254 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 ABCG4Q9H172 646 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SIX2Q9NPC8 291 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 DYRK4Q9NR20 520 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 NDFIP2Q9NV92 336 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SLC12A6Q9UHW9 1150 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 CTNND2Q9UQB3 1225 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 TLN1Q9Y490 2541 aaKnown RBP6.1□□□□□ -1.43
NUP98-215ENST00000529063 AHCTF1Q8WYP5 2266 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 FLNCQ14315 2725 aa6.1□□□□□ -1.43
NUP98-215ENST00000529063 SPTA1P02549 2419 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 SDK2Q58EX2 2172 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 CCDC187A0A096LP49 1063 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 A0A1W2PQM1 296 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 FAM170AA1A519 330 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ILVBLA1L0T0 632 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 IGLON5A6NGN9 336 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 H3BM21 787 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 J3QW42 95 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 TPP1O14773 563 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 AREL1O15033 823 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 TNFSF15O95150 251 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 GHRHP01286 108 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ITGA2BP08514 1039 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 HGFP14210 728 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ITGB6P18564 788 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 WT1P19544 449 aaPredicted RBP6.09□□□□□ -1.43
NUP98-215ENST00000529063 RBMS1P29558 406 aaKnown RBP6.09□□□□□ -1.43
NUP98-215ENST00000529063 FLT3P36888 993 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ACVRL1P37023 503 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 SULT1E1P49888 294 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ZNF165P49910 485 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 STX17P56962 302 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 GPLD1P80108 840 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 ATP11AP98196 1134 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
NUP98-215ENST00000529063 SRSF1Q07955 248 aaKnown RBP eCLIP6.09□□□□□ -1.43
NUP98-215ENST00000529063 MMRN1Q13201 1228 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms