RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 TRIM13O60858 407 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 FGF18O76093 207 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 NDST3O95803 873 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 LATS1O95835 1130 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 PDHA1P08559 390 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 SERPINF2P08697 491 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 STMN1P16949 149 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ZNF177Q13360 481 aaPredicted RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 LRRC8EQ6NSJ5 796 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ZNF549Q6P9A3 640 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 OTOP2Q7RTS6 562 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 OR13C4Q8NGS5 318 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 DNAJC1Q96KC8 554 aaKnown RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 UBXN10Q96LJ8 280 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 TLK1Q9UKI8 766 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 GBF1Q92538 1859 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 INSIG1O15503 277 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 CTSAP10619 480 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 MBL2P11226 248 aaPredicted RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 CRABP2P29373 138 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 CCR10P46092 362 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 GLRBP48167 497 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 IDH3AP50213 366 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 EPHB3P54753 998 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 RNF135Q8IUD6 432 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 HS6ST3Q8IZP7 471 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ZNF781Q8N8C0 355 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 MDGA1Q8NFP4 955 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 GPR150Q8NGU9 434 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 SIKE1Q9BRV8 207 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 TDRD1Q9BXT4 1180 aaKnown RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 YY1AP1Q9H869 796 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 DLX3O60479 287 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 PTPN4P29074 926 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
SEC16B-208ENST00000528461 CDKN2DP55273 166 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 HEXDCQ8WVB3 486 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 WWP1Q9H0M0 922 aa13.59□□□□□ -0.23
SEC16B-208ENST00000528461 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.23
SEC16B-208ENST00000528461 ALPK3Q96L96 1907 aa13.58□□□□□ -0.23
SEC16B-208ENST00000528461 EFCAB14O75071 495 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 GOT2P00505 430 aaKnown RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 C1RP00736 705 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 GPATCH11Q8N954 259 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 MAPK15Q8TD08 544 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CALML6Q8TD86 181 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 BLOC1S5Q8TDH9 187 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 ANKRD49Q8WVL7 239 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 VOPP1Q96AW1 172 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 NSL1Q96IY1 281 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 FEM1AQ9BSK4 669 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 UNKQ9C0B0 810 aaKnown RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 XPR1Q9UBH6 696 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CCDC162PA2VCL2 907 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 TMEM114B3SHH9 223 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CBX4O00257 560 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 APOA4P06727 396 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CHRNGP07510 517 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 SCNN1BP51168 640 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CLCN5P51795 746 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 PTPRRQ15256 657 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 VWA5B1Q5TIE3 1220 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 LINGO4Q6UY18 593 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 ZNF783Q6ZMS7 281 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CLP1Q92989 425 aaKnown RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 YME1L1Q96TA2 773 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CADM1Q9BY67 442 aaKnown RBP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEC16B-208ENST00000528461 DNAJC28Q9NX36 388 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CPQQ9Y646 472 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 TBL1XO60907 577 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 SERPINA6P08185 405 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 PRSS56P0CW18 603 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 ELF1P32519 619 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 CYP4F8P98187 520 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 USP4Q13107 963 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 TAF12Q16514 161 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 HECTD2Q5U5R9 776 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
SEC16B-208ENST00000528461 HERC6Q8IVU3 1022 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms