RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 BFARQ9NZS9 450 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 ZDHHC2Q9UIJ5 367 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 RIMS3Q9UJD0 308 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 PRPF19Q9UMS4 504 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 COL6A3P12111 3177 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 UNC80Q8N2C7 3258 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 MYOCOSA0A1B0GUC4 107 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 HDAC3O15379 428 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 PHGDHO43175 533 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 PIGNO95427 931 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 TFAP2AP05549 437 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 URODP06132 367 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 ERCC2P18074 760 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 GRIA4P48058 902 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
RBM39-243ENST00000528062 ZBTB17Q13105 803 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 GRM3Q14832 879 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 SPATA24Q86W54 205 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 TICAM1Q8IUC6 712 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 TTC9BQ8N6N2 239 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 PCED1BQ96HM7 432 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 DRC3Q9H069 523 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 C20orf96Q9NUD7 363 aaPredicted RBP13.13□□□□□ -0.31
RBM39-243ENST00000528062 CDH9Q9ULB4 789 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 BACE2Q9Y5Z0 518 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
RBM39-243ENST00000528062 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 TEX28O15482 410 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 CRTAMO95727 393 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 TFEBP19484 476 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 NMBRP28336 390 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 GLRBP48167 497 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 LAMB3Q13751 1172 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 ADGRE1Q14246 886 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 FLOT2Q14254 428 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 SEL1L3Q68CR1 1132 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 KIAA1841Q6NSI8 718 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 LSMEM2Q8N112 164 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 CATSPER2Q96P56 530 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 VILLO15195 856 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 CFLARO15519 480 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 FYNP06241 537 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 SAT1P21673 171 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 OR1D2P34982 312 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 NOS2P35228 1153 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 NAGLUP54802 743 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 FRG1Q14331 258 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 ARMC3Q5W041 872 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 C16orf89Q6UX73 402 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 ZYG11AQ6WRX3 759 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 MYLPFQ96A32 169 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 COPS7BQ9H9Q2 264 aaPredicted RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 PRDM16Q9HAZ2 1276 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 UBP1Q9NZI7 540 aa13.12□□□□□ -0.31
RBM39-243ENST00000528062 ZNF638Q14966 1978 aaKnown RBP13.12□□□□□ -0.31
RBM39-243ENST00000528062 TIMM44O43615 452 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 NFKB1P19838 968 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 GABRB3P28472 473 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 PCSK1P29120 753 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
RBM39-243ENST00000528062 AVPR1AP37288 418 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 CYLC2Q14093 348 aaPredicted RBP13.11□□□□□ -0.31
RBM39-243ENST00000528062 CNGA3Q16281 694 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 LIPMQ5VYY2 423 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 BHLHE22Q8NFJ8 381 aaPredicted RBP13.11□□□□□ -0.31
RBM39-243ENST00000528062 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
RBM39-243ENST00000528062 PKP2Q99959 881 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 EPB41L1Q9H4G0 881 aa13.11□□□□□ -0.31
RBM39-243ENST00000528062 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms