RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 DPY19L3Q6ZPD9 716 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 FAM72BQ86X60 149 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 DRC7Q8IY82 874 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 CCDC185Q8N715 623 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 SCG3Q8WXD2 468 aaKnown RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 TMEM159Q96B96 161 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 TBATAQ96M53 351 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 HEPHQ9BQS7 1158 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 CNPY3Q9BT09 278 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 SLC13A1Q9BZW2 595 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 SEPT11Q9NVA2 429 aaKnown RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 PISDQ9UG56 409 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 APOBEC3BQ9UH17 382 aaKnown RBP10.66□□□□□ -0.7
CPSF1-203ENST00000527916 KLF15Q9UIH9 416 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 HPCAL4Q9UM19 191 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 DOLKQ9UPQ8 538 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 MAN2B2Q9Y2E5 1009 aa10.66□□□□□ -0.7
CPSF1-203ENST00000527916 A0A1B0GTH6 734 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 ENO4A6NNW6 628 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 D6RAR5 112 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 KDELR3O43731 214 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 AP1G1O43747 822 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 LEFTY1O75610 366 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 GZMAP12544 262 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 DESP17661 470 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 ITGB7P26010 798 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 CCKBRP32239 447 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 HTR7P34969 479 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 PRKCIP41743 596 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 NEK3P51956 506 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 YBEYP58557 167 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FOXK1P85037 733 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 SRSF6Q13247 344 aaKnown RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 IQCB1Q15051 598 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 POLD3Q15054 466 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FIGNQ5HY92 759 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 EFHC2Q5JST6 749 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 RWDD4Q6NW29 188 aaKnown RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 BORAQ6PGQ7 559 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 VASH2Q86V25 355 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 PTRH1Q86Y79 214 aaKnown RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FAM26EQ8N5C1 309 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 CHST14Q8NCH0 376 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 GRIN3AQ8TCU5 1115 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 LENG8Q96PV6 779 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FUCA2Q9BTY2 467 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FOXP3Q9BZS1 431 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 EPN3Q9H201 632 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 LRRC4CQ9HCJ2 640 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 DONSONQ9NYP3 566 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 GULP1Q9UBP9 304 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 DNAI1Q9UI46 699 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 ANAPC2Q9UJX6 822 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 FZD10Q9ULW2 581 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
CPSF1-203ENST00000527916 CLEC18AA5D8T8 446 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 EIF3CLB5ME19 914 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RNF103O00237 685 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RAD51BO15315 384 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 YY2O15391 372 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CCP110O43303 1012 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RAMP2O60895 175 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 GCATO75600 419 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 POP4O95707 220 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 GSRP00390 522 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 ADRB3P13945 408 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 HGFP14210 728 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CD82P27701 267 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 EPHB2P29323 1055 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 ACVRL1P37023 503 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CASRP41180 1078 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CCNHP51946 323 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 SNRPD1P62314 119 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CYP4F2P78329 520 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 EIF2B5Q13144 721 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 MAMLD1Q13495 774 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 C1orf61Q13536 156 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 NR1I3Q14994 352 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CLCA4Q14CN2 919 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 INO80DQ53TQ3 878 aaPredicted RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 FAXCQ5TGI0 409 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CAVIN1Q6NZI2 390 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 SCYL2Q6P3W7 929 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 DCUN1D2Q6PH85 259 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CLEC18BQ6UXF7 455 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 PHACTR4Q8IZ21 702 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RBFAQ8N0V3 343 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 UMODL1-AS1Q8N2C9 162 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 ARL10Q8N8L6 244 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 RTL3Q8N8U3 475 aaKnown RBP10.64□□□□□ -0.71
CPSF1-203ENST00000527916 CLEC18CQ8NCF0 446 aa10.64□□□□□ -0.71
CPSF1-203ENST00000527916 DENND6BQ8NEG7 585 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms