RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 HDAC11Q96DB2 347 aa12.57□□□□□ -0.4
TSKU-203ENST00000527881 COQ7Q99807 217 aa12.57□□□□□ -0.4
TSKU-203ENST00000527881 HOXD1Q9GZZ0 328 aa12.57□□□□□ -0.4
TSKU-203ENST00000527881 HACD3Q9P035 362 aa12.57□□□□□ -0.4
TSKU-203ENST00000527881 MTF2Q9Y483 593 aaPredicted RBP12.57□□□□□ -0.4
TSKU-203ENST00000527881 MFHAS1Q9Y4C4 1052 aa12.57□□□□□ -0.4
TSKU-203ENST00000527881 GOLGA8CPA6NN73 597 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 DLX3O60479 287 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 FCGR1AP12314 374 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 YWHAQP27348 245 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 LEPRP48357 1165 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 HK2P52789 917 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 ILF2Q12905 390 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 ARHGEF16Q5VV41 709 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 FAM183BPQ6ZVS7 135 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 RFPL4BQ6ZWI9 263 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 SH3BP5LQ7L8J4 393 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CATSPER4Q7RTX7 472 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 LINC00523Q86TU6 105 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 KCNMB4Q86W47 210 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 LRRC49Q8IUZ0 686 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 PLD3Q8IV08 490 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 FIG4Q92562 907 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 SLC10A4Q96EP9 437 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 RAD54BQ9Y620 910 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 KCNK1O00180 336 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CPNE6O95741 557 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 PCNAP12004 261 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 HTR1BP28222 390 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CCT8P50990 548 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 SLC12A2P55011 1212 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 NSUN2Q08J23 767 aaKnown RBP eCLIP12.56□□□□□ -0.4
TSKU-203ENST00000527881 EMC2Q15006 297 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CYS1Q717R9 158 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 SLC41A1Q8IVJ1 513 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 C8orf59Q8N0T1 100 aaPredicted RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 KDM1BQ8NB78 822 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 IL22Q9GZX6 179 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 FBRSL1Q9HCM7 1045 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 MRGBPQ9NV56 204 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CD300AQ9UGN4 299 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 NME4O00746 187 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 RFPL2O75678 378 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 MLNP12872 115 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 VBP1P61758 197 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 TGFB2P61812 414 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 VPS72Q15906 364 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 VPS26BQ4G0F5 336 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 AASDHQ4L235 1098 aaPredicted RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 CCDC58Q4VC31 144 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 ILDR2Q71H61 639 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 TRPV3Q8NET8 790 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 DNAJB14Q8TBM8 379 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 MAELQ96JY0 434 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 ZNF668Q96K58 619 aaPredicted RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 YTHDF1Q9BYJ9 559 aaKnown RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 COA1Q9GZY4 146 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 TMEM181Q9P2C4 612 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 FAM198AQ9UFP1 575 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 HMGXB4Q9UGU5 601 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 ANAPC2Q9UJX6 822 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 VANGL2Q9ULK5 521 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 ACOT9Q9Y305 439 aa12.56□□□□□ -0.4
TSKU-203ENST00000527881 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
TSKU-203ENST00000527881 ZSCAN5BA6NJL1 495 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 C2CD4BA6NLJ0 364 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 ARPC2O15144 300 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 INMTO95050 263 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 SHMT2P34897 504 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 FAM83EQ2M2I3 478 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 LRIT3Q3SXY7 679 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 NDNFQ8TB73 568 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 ELMO1Q92556 727 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 PHF21BQ96EK2 531 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 LHX5Q9H2C1 402 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
TSKU-203ENST00000527881 AKIP1Q9NQ31 210 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 AQP12BA6NM10 295 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 CHRM3P20309 590 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 ARL4AP40617 200 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 FAM219BQ5XKK7 198 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 TRNP1Q6NT89 227 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 AQP12AQ8IXF9 295 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 SPARTQ8N0X7 666 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 NXNL1Q96CM4 212 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
TSKU-203ENST00000527881 DBNDD1Q9H9R9 158 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms