RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 DNAJB14Q8TBM8 379 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ATL1Q8WXF7 558 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 NXNL1Q96CM4 212 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 COLEC11Q9BWP8 271 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF717Q9BY31 904 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 FUT8Q9BYC5 575 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PUS3Q9BZE2 481 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 WHRNQ9P202 907 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SNX6Q9UNH7 406 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ARL5AQ9Y689 179 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SALL1Q9NSC2 1324 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CLDN25C9JDP6 229 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 XYLBO75191 536 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SEC22BO75396 215 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CLPXO76031 633 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 IFNA10P01566 189 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TUBG1P23258 451 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CASP1P29466 404 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CTNNB1P35222 781 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TSPAN5P62079 268 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ADAM8P78325 824 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CYP4F8P98187 520 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CDK16Q00536 496 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 MTM1Q13496 603 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CSHL1Q14406 222 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CRTC3Q6UUV7 619 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PHACTR4Q8IZ21 702 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ABRAQ8N0Z2 381 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 OR2L5Q8NG80 312 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CASKIN2Q8WXE0 1202 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SMG7Q92540 1137 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TOP1MTQ969P6 601 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ADGRE3Q9BY15 652 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 RC3H2Q9HBD1 1191 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.28□□□□□ -1.242e-7■■□□□ 14.4
CTNND1-216ENST00000527467 APEX2Q9UBZ4 518 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 GMEB2Q9UKD1 530 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 AGO2Q9UKV8 859 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 COG5Q9UP83 839 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SORCS3Q9UPU3 1222 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 AKAP12Q02952 1782 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 EML1O00423 815 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 DNM1LO00429 736 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 MUSKO15146 869 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PMPCBO75439 489 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CCNB2O95067 398 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 MT-CO1P00395 513 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF3P17036 446 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PRDX5P30044 214 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 USP11P51784 963 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 DRG2P55039 364 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SLC10A7Q0GE19 358 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 BATFQ16520 125 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 MEA1Q16626 185 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 FSCN1Q16658 493 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TMPRSS11AQ6ZMR5 421 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 EGFL6Q8IUX8 553 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF366Q8N895 744 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 RASGEF1AQ8N9B8 481 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 RP9Q8TA86 221 aaKnown RBP7.28□□□□□ -1.24
CTNND1-216ENST00000527467 SLC30A5Q8TAD4 765 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CD300LFQ8TDQ1 290 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 AGAP11Q8TF27 550 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 TIFAQ96CG3 184 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 FAM20AQ96MK3 541 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 ASB2Q96Q27 587 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 GPER1Q99527 375 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 NEUROD4Q9HD90 331 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 PDGFCQ9NRA1 345 aa7.28□□□□□ -1.24
CTNND1-216ENST00000527467 A0A1B0GVC2 190 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 PDLIM1O00151 329 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 GADD45AP24522 165 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 ETFBP38117 255 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 CREB5Q02930 508 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 PTPN11Q06124 597 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-216ENST00000527467 BNIP1Q12981 228 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 SCGB2A2Q13296 93 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 SV2CQ496J9 727 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 ATP13A4Q4VNC1 1196 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 BOLA3Q53S33 107 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 CEP68Q76N32 757 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 ARMC10Q8N2F6 343 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 CHCHD4Q8N4Q1 142 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 OR56A4Q8NGH8 313 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 OR14K1Q8NGZ2 314 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 PHF10Q8WUB8 498 aaKnown RBP7.27□□□□□ -1.25
CTNND1-216ENST00000527467 PTCD2Q8WV60 388 aaKnown RBP7.27□□□□□ -1.25
CTNND1-216ENST00000527467 TAMM41Q96BW9 452 aa7.27□□□□□ -1.25
CTNND1-216ENST00000527467 RPRD1AQ96P16 312 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms