RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SLC13A1Q9BZW2 595 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 ADAMTS10Q9H324 1103 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 TMEM245Q9H330 911 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 ZHX3Q9H4I2 956 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 ACAD9Q9H845 621 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 RC3H2Q9HBD1 1191 aaKnown RBP5.86□□□□□ -1.47
CD44-225ENST00000527326 ZFP64Q9NPA5 681 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 POLE3Q9NRF9 147 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 MCM9Q9NXL9 1143 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 MAT2BQ9NZL9 334 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 VTI1BQ9UEU0 232 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 ENOPH1Q9UHY7 261 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 DENND2AQ9ULE3 1009 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 PTPN22Q9Y2R2 807 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 TCAF1Q9Y4C2 921 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 SNX8Q9Y5X2 465 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 AUP1Q9Y679 476 aa5.86□□□□□ -1.47
CD44-225ENST00000527326 PLCH1Q4KWH8 1693 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 TNKSO95271 1327 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 C17orf113A0A1B0GUU1 675 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 C7orf72A4D263 438 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ADAMTS4O75173 837 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ZNF780AO75290 641 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 USP12O75317 370 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 BCAS2O75934 225 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 FAM155BO75949 473 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 PRKD3O94806 890 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GHRHP01286 108 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 APOC1P02654 83 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 IFIT1P09914 478 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 MBL2P11226 248 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 PSKH1P11801 424 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 IL7P13232 177 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 CHRNB2P17787 502 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 RAB3AP20336 220 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ITGALP20701 1170 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 BGNP21810 368 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 PROZP22891 400 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 EPHA3P29320 983 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 NOS3P29474 1203 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ERP29P30040 261 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 L1CAMP32004 1257 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 EIF2DP41214 584 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 ETV4P43268 484 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ALDH7A1P49419 539 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 GDI2P50395 445 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 AQP5P55064 265 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 JAM2P57087 298 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SNX16P57768 344 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GSTO1P78417 241 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 MRPS22P82650 360 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 FLI1Q01543 452 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 SLC18A2Q05940 514 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 CSTF3Q12996 717 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 PPIL2Q13356 520 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 IKZF1Q13422 519 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 RIN1Q13671 783 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GALEQ14376 348 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 PPP2R5DQ14738 602 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 MFSD13AQ14CX5 517 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 IL17AQ16552 155 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 HIST2H2ACQ16777 129 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 PLEKHG6Q3KR16 790 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 VWA5B1Q5TIE3 1220 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 BROXQ5VW32 411 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GDF6Q6KF10 455 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 RINT1Q6NUQ1 792 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SHQ1Q6PI26 577 aaKnown RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 ARHGAP36Q6ZRI8 547 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 CREB3L2Q70SY1 520 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ATG9AQ7Z3C6 839 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KCNK18Q7Z418 384 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ZNF438Q7Z4V0 828 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ADCK1Q86TW2 530 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SLCO6A1Q86UG4 719 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 CDH24Q86UP0 819 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 NOXA1Q86UR1 476 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 STK32CQ86UX6 486 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 LYSMD2Q8IV50 215 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 RASGRP3Q8IV61 690 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 NKAIN4Q8IVV8 208 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ARID3BQ8IVW6 561 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 ARHGEF19Q8IW93 802 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 LILRA2Q8N149 483 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 SCML4Q8N228 414 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ANKFN1Q8N957 763 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 KIAA0895Q8NCT3 520 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ZNF680Q8NEM1 530 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 CMASQ8NFW8 434 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 ZFAND1Q8TCF1 268 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.85□□□□□ -1.47
CD44-225ENST00000527326 JDP2Q8WYK2 163 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 LPGAT1Q92604 370 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 GTF2H4Q92759 462 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 E2F7Q96AV8 911 aa5.85□□□□□ -1.47
CD44-225ENST00000527326 TESCQ96BS2 214 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms