RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 H3BNX3 289 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 RNMTO43148 476 aaKnown RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 EPB41L2O43491 1005 aaKnown RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 SLC25A17O43808 307 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SH3BP5O60239 455 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 DDAH2O95865 285 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SERPINC1P01008 464 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SCP2P22307 547 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 ELF1P32519 619 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TNNT2P45379 298 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 AMPHP49418 695 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TBX2Q13207 712 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 RUNX2Q13950 521 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SEMA3AQ14563 771 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 PTGR1Q14914 329 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 PRTGQ2VWP7 1150 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 LEXMQ3ZCV2 418 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 FBXO43Q4G163 708 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 FAM69AQ5T7M9 428 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 LVRNQ6Q4G3 990 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 COLCA1Q6ZS62 124 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TOM1L2Q6ZVM7 507 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 KDELC2Q7Z4H8 507 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 LURAP1LQ8IV03 231 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SAMD14Q8IZD0 417 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 MMP21Q8N119 569 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 CPXM2Q8N436 756 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SETD9Q8NE22 299 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 RASSF8Q8NHQ8 419 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 GDPD5Q8WTR4 605 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 ST8SIA4Q92187 359 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 RNF125Q96EQ8 232 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 RRP36Q96EU6 259 aaKnown RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 MPHOSPH8Q99549 860 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 FRMD8Q9BZ67 464 aaPredicted RBP4.1□□□□□ -1.75
CD44-219ENST00000525685 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SPAG4Q9NPE6 437 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 UBN1Q9NPG3 1134 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 RNF146Q9NTX7 359 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 ZDHHC7Q9NXF8 308 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 GRHL1Q9NZI5 618 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TBC1D14Q9P2M4 693 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 NLKQ9UBE8 527 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 PEMTQ9UBM1 199 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 FBXO40Q9UH90 709 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 SQORQ9Y6N5 450 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 TNS2Q63HR2 1409 aa4.1□□□□□ -1.75
CD44-219ENST00000525685 PKD1L3Q7Z443 1732 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 A0A096LPK6 155 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 TEX13CA0A0J9YWL9 993 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 STMND1H3BQB6 276 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 EYA2O00167 538 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 WDHD1O75717 1129 aaPredicted RBP4.09□□□□□ -1.75
CD44-219ENST00000525685 ADAP00813 363 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 SNHG28P0DPA3 235 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 POU1F1P28069 291 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 TNFSF8P32971 234 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 ENTPD1P49961 510 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 TUBP50607 506 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 PPATQ06203 517 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 VEPH1Q14D04 833 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 SYTL3Q4VX76 610 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 NAPEPLDQ6IQ20 393 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 HEPHL1Q6MZM0 1159 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 CES5AQ6NT32 575 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 PRSS45Q7RTY3 260 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 MON1AQ86VX9 555 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 LSM14AQ8ND56 463 aaKnown RBP4.09□□□□□ -1.75
CD44-219ENST00000525685 ZNF548Q8NEK5 533 aaPredicted RBP4.09□□□□□ -1.75
CD44-219ENST00000525685 ZCCHC10Q8TBK6 192 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 NSMCE1Q8WV22 266 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 RAB40AQ8WXH6 277 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 B3GNT4Q9C0J1 378 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 PAIP1Q9H074 479 aaKnown RBP4.09□□□□□ -1.75
CD44-219ENST00000525685 CXorf56Q9H5V9 222 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 JMJD4Q9H9V9 463 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 IL21RQ9HBE5 538 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 SEMA4BQ9NPR2 832 aaPredicted RBP4.09□□□□□ -1.75
CD44-219ENST00000525685 ATP8A2Q9NTI2 1148 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 POLKQ9UBT6 870 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 GJD2Q9UKL4 321 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 PCDHGB5Q9Y5G0 923 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 PARD3Q8TEW0 1356 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 OVOS2A0A0G2JMS6 1433 aa4.09□□□□□ -1.75
CD44-219ENST00000525685 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TRBV5-7A0A0A0MS05 114 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 C17orf113A0A1B0GUU1 675 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM90A10PA6NDY2 464 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM90A7PA6NKC0 464 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM90A22PA8MWA6 464 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM90A12PA8MX19 464 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM90A23PA8MXZ1 464 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ZNF814B7Z6K7 855 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 FAM157AC9JC47 383 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 H0YGN5 161 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TLX3O43711 291 aaPredicted RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 MMP3P08254 477 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 UNGP13051 313 aaPredicted RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 SLC2A4P14672 509 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms