RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OR4A15Q8NGL6 344 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 HTR3CQ8WXA8 447 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CATSPERZQ9NTU4 200 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 KANTRA0A1W2PQU2 76 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 DHRS12A0PJE2 317 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 HCN1O60741 890 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 PGRP06401 933 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF772Q68DY9 489 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 FAM47BQ8NA70 645 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 MAFIPQ8WZ33 124 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ZCCHC11Q5TAX3 1644 aaKnown RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 L7N2F9 121 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CCRL2O00421 344 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 LDOC1O95751 146 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 TUBP50607 506 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 VAMP2P63027 116 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 OLR1P78380 273 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF844Q08AG5 666 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ITGA7Q13683 1181 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 FAM76BQ5HYJ3 339 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CWF19L1Q69YN2 538 aaKnown RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 C16orf59Q7L2K0 433 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 FSTL5Q8N475 847 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 NXNL1Q96CM4 212 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 C17orf102A2RUQ5 167 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RAB12Q6IQ22 244 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF700Q9H0M5 742 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 METP08581 1390 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ANXA5P08758 320 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 AMPD1P23109 780 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 TUBA4AP68366 448 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ADAM8P78325 824 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 C5orf34Q96MH7 638 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 PLEKHA1Q9HB21 404 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 MALT1Q9UDY8 824 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 LOC100509620A0A075B734 347 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 TRIM64CA6NLI5 447 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 CHST10O43529 356 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SERPINB7O75635 380 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 HERVK_113P62684 666 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 DLG4P78352 724 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 PHC1P78364 1004 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 HSPA14Q0VDF9 509 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 FNDC3BQ53EP0 1204 aaKnown RBP13.73□□□□□ -0.21
LRRK1-202ENST00000525284 PRAMEF17Q5VTA0 474 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 KYAT3Q6YP21 454 aaKnown RBP13.73□□□□□ -0.21
LRRK1-202ENST00000525284 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 LINGO2Q7L985 606 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
LRRK1-202ENST00000525284 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 H0Y858 1186 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SUV39H1O43463 412 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 NOS2P35228 1153 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 TUBA3CQ13748 450 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RETSATQ6NUM9 610 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 KAT2AQ92830 837 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 FAM105AQ9NUU6 356 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 MEMO1Q9Y316 297 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ACTL7BQ9Y614 415 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 FAM86C2PA6NEL3 165 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
LRRK1-202ENST00000525284 UGT2B17O75795 530 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 ITGB1P05556 798 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 URODP06132 367 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 CASP9P55211 416 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 KCNJ2P63252 427 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RHEBQ15382 184 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 FAM153CQ494X1 144 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 MXRA8Q9BRK3 442 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 IGFLR1Q9H665 355 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 SMPD4Q9NXE4 827 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RAB23Q9ULC3 237 aa13.73□□□□□ -0.21
LRRK1-202ENST00000525284 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 DCDC1P59894 354 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 BMT2Q1RMZ1 405 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 PTGR2Q8N8N7 351 aaPredicted RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TBC1D10AQ9BXI6 508 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
LRRK1-202ENST00000525284 STAG3L1P0CL83 205 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 TTMPQ5BVD1 217 aa13.72□□□□□ -0.21
LRRK1-202ENST00000525284 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms