RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 SLC46A3Q7Z3Q1 461 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 USP37Q86T82 979 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 LDHDQ86WU2 507 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PDSS2Q86YH6 399 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 UNC5BQ8IZJ1 945 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TTC5Q8N0Z6 440 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 DTWD1Q8N5C7 304 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TRIML2Q8N7C3 387 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PLD5Q8N7P1 536 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 ZNF321PQ8N8H1 164 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 C12orf50Q8NA57 414 aaPredicted RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 DNERQ8NFT8 737 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 WDR48Q8TAF3 677 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PTPMT1Q8WUK0 201 aaPredicted RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 KAT2AQ92830 837 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 CCDC51Q96ER9 411 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TSPAN17Q96FV3 270 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TPD52L3Q96J77 140 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PLIN2Q99541 437 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 ZBTB18Q99592 522 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PAAF1Q9BRP4 392 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 SIKE1Q9BRV8 207 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 OSBPL8Q9BZF1 889 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 RTN4RQ9BZR6 473 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 C11orf54Q9H0W9 315 aaPredicted RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 RNF208Q9H0X6 261 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 RMND5AQ9H871 391 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PARVGQ9HBI0 331 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 ERVK13-1Q9NX77 482 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 OGFRQ9NZT2 677 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 VPS18Q9P253 973 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TNFRSF10DQ9UBN6 386 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 HDAC6Q9UBN7 1215 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 TRMT6Q9UJA5 497 aaKnown RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 GMEB2Q9UKD1 530 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 DNPEPQ9ULA0 475 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 BARX2Q9UMQ3 279 aaPredicted RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 ANGEL1Q9UNK9 670 aaKnown RBP4.55□□□□□ -1.68
CD44-213ENST00000525209 PLEKHA6Q9Y2H5 1048 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PCDHB4Q9Y5E5 795 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PCDHA10Q9Y5I2 948 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PTPRGP23470 1445 aa4.55□□□□□ -1.68
CD44-213ENST00000525209 PLEKHG2Q9H7P9 1386 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TOP2BQ02880 1626 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ACEP12821 1306 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ZNF644Q9H582 1327 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 LOC105369274A0A096LPK9 316 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TRBV2A0A0J9YWF9 115 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 EDDM13A0A1B0GTR0 161 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FAM230AA0A1W2PPH8 454 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 A0A1W2PRG0 241 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TCRBV5S2A0A599 114 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TMEM82A0PJX8 343 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TRIM49BA6NDI0 452 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FAM90A8PA6NJQ4 464 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 VGLL3A8MV65 326 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 F8VZ95 297 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 STMND1H3BQB6 276 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 BIN1O00499 593 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MEIS2O14770 477 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ATP2A1O14983 1001 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 PRICKLE3O43900 615 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 RANBP6O60518 1105 aaKnown RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 MITFO75030 526 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 SLC43A1O75387 559 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CTAG2O75638 210 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 IDH1O75874 414 aaKnown RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 PRSS23O95084 383 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FGBP02675 491 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 PCCBP05166 539 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 LIPFP07098 398 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GALTP07902 379 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FAM90A13PP0C7W8 464 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FAM90A24PP0C7X0 464 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 RALAP11233 206 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 AREGP15514 252 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 VCLP18206 1134 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ITIH1P19827 911 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CYP2A7P20853 494 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ACHEP22303 614 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 THBS2P35442 1172 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 VIPR2P41587 438 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ARHGAP25P42331 645 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CAMPP49913 170 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CDR1P51861 262 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HSPA2P54652 639 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 UCP2P55851 309 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HUNKP57058 714 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 RBM6P78332 1123 aaKnown RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 FHL3Q13643 280 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HNRNPDQ14103 355 aaKnown RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 MCMDC2Q4G0Z9 681 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ZNF789Q5FWF6 425 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 XKR3Q5GH77 459 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CFAP157Q5JU67 520 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms