RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 ENC1O14682 589 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 DDX3YO15523 660 aaKnown RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 CST8O60676 142 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 LDOC1O95751 146 aaPredicted RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 GSRP00390 522 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 ITGAVP06756 1048 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 CCNCP24863 283 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 GARSP41250 739 aaKnown RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 ACADVLP49748 655 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 SNRPD1P62314 119 aaKnown RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 ARF5P84085 180 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 RAD51Q06609 339 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 CCDC15Q0P6D6 951 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 FGL2Q14314 439 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 GRM3Q14832 879 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 SEL1L2Q5TEA6 688 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 KAZNQ674X7 775 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 NAPEPLDQ6IQ20 393 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 BBS12Q6ZW61 710 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 TRIM69Q86WT6 500 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 ALG3Q92685 438 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 P3H4Q92791 437 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 CNDP2Q96KP4 475 aaKnown RBP12.34□□□□□ -0.43
CHKA-203ENST00000525155 OSBPL8Q9BZF1 889 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 CARD9Q9H257 536 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 GDF3Q9NR23 364 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 FTSJ1Q9UET6 329 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 AMACRQ9UHK6 382 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
CHKA-203ENST00000525155 HACD1B0YJ81 288 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 APOC4-APOC2K7ER74 178 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 SLC7A4O43246 635 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 MTSS1O43312 755 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 MFSD11O43934 449 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 BNIP3LO60238 219 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 MAFKO60675 156 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 NEBLO76041 1014 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 APOC2P02655 101 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PYGMP11217 842 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PRLRP16471 622 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 CHRNA3P32297 505 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 NSUN2Q08J23 767 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHKA-203ENST00000525155 ZNF284Q2VY69 593 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 ZNF569Q5MCW4 686 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PRPF39Q86UA1 669 aaKnown RBP12.33□□□□□ -0.44
CHKA-203ENST00000525155 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 TMPRSS12Q86WS5 348 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 CCNYQ8ND76 341 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 MAIP1Q8WWC4 291 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 HAUS1Q96CS2 278 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 LRIG1Q96JA1 1093 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 BMFQ96LC9 184 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 CINPQ9BW66 212 aaPredicted RBP12.33□□□□□ -0.44
CHKA-203ENST00000525155 FRMD8P1Q9BZ68 369 aaPredicted RBP12.33□□□□□ -0.44
CHKA-203ENST00000525155 TNKS2Q9H2K2 1166 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 UCKL1Q9NWZ5 548 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PCDHGA1Q9Y5H4 931 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
CHKA-203ENST00000525155 DOCK4Q8N1I0 1966 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 J3KR12 359 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 MATN3O15232 486 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 SLC31A1O15431 190 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 RNGTTO60942 597 aaKnown RBP12.32□□□□□ -0.44
CHKA-203ENST00000525155 SDC3O75056 442 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 TMCC1O94876 653 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 POP4O95707 220 aaKnown RBP12.32□□□□□ -0.44
CHKA-203ENST00000525155 IGSF6O95976 241 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 PRNPP04156 253 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 MYF5P13349 255 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 KRT10P13645 584 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 CES1P23141 567 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 CSNK1DP48730 415 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 DNA2P51530 1060 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 CLDN2P57739 230 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 RHOAP61586 193 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 DYNLT1P63172 113 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 GBE1Q04446 702 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHKA-203ENST00000525155 XRCC4Q13426 336 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 ZNF235Q14590 738 aa12.32□□□□□ -0.44
CHKA-203ENST00000525155 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
CHKA-203ENST00000525155 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms