RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RTKNQ9BST9 563 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 WRAP53Q9BUR4 548 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 FSD1LQ9BXM9 530 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC17A9Q9BYT1 436 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 FRMD8P1Q9BZ68 369 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC32A1Q9H598 525 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 CAPN10Q9HC96 672 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA6AQ9NYA3 693 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRHDEQ9UKU6 1024 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PHTF1Q9UMS5 762 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PACSIN2Q9UNF0 486 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 RPL26L1Q9UNX3 145 aaKnown RBP5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ITM2BQ9Y287 266 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANKRD6Q9Y2G4 727 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDHGC4Q9Y5F7 938 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 RAI2Q9Y5P3 530 aa5.44□□□□□ -1.54
HMGB1P40-201ENST00000525121 ATG2BQ96BY7 2078 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A0U1RQJ8 604 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 IGLON5A6NGN9 336 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 C4orf47A7E2U8 309 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 H3BM21 787 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TLR4O00206 839 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PSMD11O00231 422 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TOR1BO14657 336 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RIOK3O14730 519 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC30A4O14863 429 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 AREL1O15033 823 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 DDX3YO15523 660 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 KCNN4O15554 427 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 HTRA2O43464 458 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 MMP20O60882 483 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANXA9O76027 345 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PGLSO95336 258 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PAK4O96013 591 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RBP3P10745 1247 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 C6P13671 934 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF30P17039 623 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CR2P20023 1033 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TGM1P22735 817 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 HTR1BP28222 390 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 VIPR1P32241 457 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ACTN2P35609 894 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CD86P42081 329 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RABIFP47224 123 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ID4P47928 161 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 LIG3P49916 1009 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PEX5P50542 639 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCT8P50990 548 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 THOP1P52888 689 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRAF2Q12933 501 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZBTB17Q13105 803 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC14A1Q13336 389 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PUM1Q14671 1186 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC14Q15048 493 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ACOX1Q15067 660 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC14A2Q15849 920 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCSK7Q16549 785 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RSPO4Q2I0M5 234 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 KIF19Q2TAC6 998 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM52BQ4KMG9 183 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM259Q4ZIN3 620 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TEX44Q53QW1 395 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 MEI1Q5TIA1 1274 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 DENND2CQ68D51 928 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 KYAT3Q6YP21 454 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARHGEF18Q6ZSZ5 1173 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 DPPA4Q7L190 304 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PID1Q7Z2X4 250 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PGBD5Q8N414 524 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 LPCAT1Q8NF37 534 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ACTL9Q8TC94 416 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCHCR1Q8TD31 782 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRN4Q8WUT4 740 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPOCK2Q92563 424 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RMDN1Q96DB5 314 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDLIM2Q96JY6 352 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 LENG8Q96PV6 779 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SRPK1Q96SB4 655 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 NAP1L3Q99457 506 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 IL12RB2Q99665 862 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 C1QTNF2Q9BXJ5 285 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 TDRD1Q9BXT4 1180 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CEP41Q9BYV8 373 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC25A51Q9H1U9 297 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 CARD9Q9H257 536 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 GAREM1Q9H706 876 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 GLOD4Q9HC38 313 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDH9Q9HC56 1237 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 FZD3Q9NPG1 666 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 SAE1Q9UBE0 346 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 B4GALT6Q9UBX8 382 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 RSPH14Q9UHP6 348 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZFR2Q9UPR6 939 aaKnown RBP5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 JRKLQ9Y4A0 524 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 DOCK4Q8N1I0 1966 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 FANCMQ8IYD8 2048 aa5.43□□□□□ -1.54
HMGB1P40-201ENST00000525121 PLXND1Q9Y4D7 1925 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TTC24A2A3L6 582 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms