RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 NENFQ9UMX5 172 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 WDFY3Q8IZQ1 3526 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 FAM208BQ5VWN6 2430 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 TTC24A2A3L6 582 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-203ENST00000525013 SCAMP1O15126 338 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 AKR1B10O60218 316 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 CAPNS1P04632 268 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 H2AFZP0C0S5 128 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 ACP1P24666 158 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 MMP12P39900 470 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 AP1S1P61966 158 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 YPEL5P62699 121 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 POLR2LP62875 67 aaKnown RBP18.69■□□□□ 0.58
CAPN1-203ENST00000525013 EIF2B5Q13144 721 aaKnown RBP18.69■□□□□ 0.58
CAPN1-203ENST00000525013 SLC18A3Q16572 532 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 HES3Q5TGS1 186 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 H2AFVQ71UI9 128 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 PROSER1Q86XN7 944 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 TP53I13Q8NBR0 393 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-203ENST00000525013 LMX1AQ8TE12 382 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 DNAJC7Q99615 494 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 DUSP23Q9BVJ7 150 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 UVRAGQ9P2Y5 699 aa18.69■□□□□ 0.58
CAPN1-203ENST00000525013 K7ESM1 405 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 TAF4O00268 1085 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 AQP9O43315 295 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 CD48P09326 243 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 GIMD1P0DJR0 217 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 MYF5P13349 255 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 WSCD2Q2TBF2 565 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 ATP13A4Q4VNC1 1196 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 ZFYVE27Q5T4F4 411 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 FAXCQ5TGI0 409 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 CPNE8Q86YQ8 564 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 VSTM4Q8IW00 320 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 BBS5Q8N3I7 341 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 PDCD7Q8N8D1 485 aaKnown RBP18.68■□□□□ 0.58
CAPN1-203ENST00000525013 KCTD6Q8NC69 237 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 APOLD1Q96LR9 279 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 SLC13A1Q9BZW2 595 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 SCUBE2Q9NQ36 999 aa18.68■□□□□ 0.58
CAPN1-203ENST00000525013 RCOR3Q9P2K3 495 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-203ENST00000525013 ZFYVE26Q68DK2 2539 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 RP1P56715 2156 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 TMEM110-MUSTN1A8MSY1 372 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 A8MX80 341 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 TOR1BO14657 336 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 MAFKO60675 156 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 PROSCO94903 275 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 CKMT1AP12532 417 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 IL4RP24394 825 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 HSPA9P38646 679 aaKnown RBP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 E2F1Q01094 437 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 CYP4F3Q08477 520 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 TARDBPQ13148 414 aaKnown RBP eCLIP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 CAMK2BQ13554 666 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 PRRT3Q5FWE3 981 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 PHACTR4Q8IZ21 702 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 RBFAQ8N0V3 343 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 PDCD6IPQ8WUM4 868 aaKnown RBP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 ECHDC3Q96DC8 303 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 IL12RB2Q99665 862 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 TCEAL2Q9H3H9 227 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 EVA1BQ9NVM1 165 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 SPASTQ9UBP0 616 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 APOBEC3BQ9UH17 382 aaKnown RBP18.67■□□□□ 0.58
CAPN1-203ENST00000525013 CSNK1G3Q9Y6M4 447 aa18.67■□□□□ 0.58
CAPN1-203ENST00000525013 SSU72P8A0A1W2PR75 194 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 TRAFD1O14545 582 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-203ENST00000525013 PEX11BO96011 259 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 PCCBP05166 539 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 ELFN1P0C7U0 828 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 MMP13P45452 471 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 DUSP3P51452 185 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-203ENST00000525013 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
CAPN1-203ENST00000525013 TAS2R40P59535 323 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 PPARDQ03181 441 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 C1orf61Q13536 156 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 DPYSL3Q14195 570 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 INPP5AQ14642 412 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 ASTE1Q2TB18 679 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-203ENST00000525013 DEFB133Q30KQ1 61 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 MARC1Q5VT66 337 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 MACC1Q6ZN28 852 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 PGBD5Q8N414 524 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 NSMCE3Q96MG7 304 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 NOD2Q9HC29 1040 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 ABHD10Q9NUJ1 306 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 PCDHGC4Q9Y5F7 938 aa18.66■□□□□ 0.58
CAPN1-203ENST00000525013 KRT7P08729 469 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 PEX5P50542 639 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 ARSEP51690 589 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 MAXP61244 160 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 INSM1Q01101 510 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-203ENST00000525013 RALGDSQ12967 914 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 MESDQ14696 234 aa18.65■□□□□ 0.58
CAPN1-203ENST00000525013 ANKRD20A8PQ5CZ79 823 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms