RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 GUCY1A3Q02108 690 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 KPNB1Q14974 876 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 RCN1Q15293 331 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 PLEKHA7Q6IQ23 1121 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ZNF556Q9HAH1 456 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 FBXW11Q9UKB1 542 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 MAN2B1O00754 1011 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 ACADSP16219 412 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 BMPR2Q13873 1038 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 MON1BQ7L1V2 547 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CATSPER1Q8NEC5 780 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 NAF1Q96HR8 494 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 IL36AQ9UHA7 158 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CPSF4O95639 269 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 SPAM1P38567 509 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 WNT3AP56704 352 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 ATP13A4Q4VNC1 1196 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 TXNDC8Q6A555 127 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 DAW1Q8N136 415 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 OR4L1Q8NH43 312 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 BBS4Q96RK4 519 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 WRAP53Q9BUR4 548 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 ING2Q9H160 280 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 GNEQ9Y223 722 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 BMP6P22004 513 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CSKP41240 450 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CARD16Q5EG05 197 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CIR1Q86X95 450 aaPredicted RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 FNIP1Q8TF40 1166 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 PPP1R10Q96QC0 940 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 POLG2Q9UHN1 485 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 GMEB2Q9UKD1 530 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 EPHB6O15197 1021 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 AHCYL1O43865 530 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 EN2P19622 333 aaPredicted RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 CST5P28325 142 aaPredicted RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 SKIV2L2P42285 1042 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 RPIAP49247 311 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 ATP6AP1LQ52LC2 224 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 IRF2BP2Q7Z5L9 587 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 NOA1Q8NC60 698 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 DNAJC1Q96KC8 554 aaKnown RBP17.14■□□□□ 0.33
BEST1-203ENST00000524877 GGT7Q9UJ14 662 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 GGA2Q9UJY4 613 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CHKBQ9Y259 395 aa17.14■□□□□ 0.33
BEST1-203ENST00000524877 CA3P07451 260 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 UBTFL6P0CB48 400 aaPredicted RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 ECT2LQ008S8 904 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 ABRQ12979 859 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 WDR45BQ5MNZ6 344 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 ADCK1Q86TW2 530 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 PACS2Q86VP3 889 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 OR7D4Q8NG98 312 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 CMTM5Q96DZ9 223 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 TOX2Q96NM4 488 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 MRPS26Q9BYN8 205 aaKnown RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 RHBGQ9H310 441 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 IMP3Q9NV31 184 aaKnown RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 ASF1AQ9Y294 204 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 ANXA6P08133 673 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 CCR3P51677 355 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 AASDHQ4L235 1098 aaPredicted RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 CEP78Q5JTW2 689 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 PCDHB18PQ96TA0 734 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 UNKQ9C0B0 810 aaKnown RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 ENTPD4Q9Y227 616 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 EDDM13A0A1B0GTR0 161 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 FLT3P36888 993 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 IL10RBQ08334 325 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 DNAJB4Q9UDY4 337 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 ARL2BPQ9Y2Y0 163 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 PCDHGC5Q9Y5F6 944 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 MBLAC2Q68D91 279 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
BEST1-203ENST00000524877 CRYBG2Q8N1P7 616 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 SIPA1Q96FS4 1042 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 MAGED4Q96JG8 741 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 GKN1Q9NS71 199 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 PIRTP0C851 137 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 ENO3P13929 434 aaPredicted RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 GPR135Q8IZ08 494 aa17.13■□□□□ 0.33
BEST1-203ENST00000524877 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
BEST1-203ENST00000524877 S100A1P23297 94 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 SPIDRQ14159 915 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 NR6A1Q15406 480 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 UPP1Q16831 310 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ZNF398Q8TD17 642 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 AP2M1Q96CW1 435 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 FZD10Q9ULW2 581 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 RNF103-CHMP3A0A140T963 221 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 TM7SF2O76062 418 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 TAS2R40P59535 323 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms