RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	CCDC126	Q96EE4	140 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	MYRFL	Q96LU7	910 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	TMEM237	Q96Q45	408 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CLSTN3	Q9BQT9	956 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ADGRE3	Q9BY15	652 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	MFSD1	Q9H3U5	465 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF576	Q9H609	170 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	ARHGEF3	Q9NR81	526 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CATSPERZ	Q9NTU4	200 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SMPD4	Q9NXE4	827 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC2A6	Q9UGQ3	507 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	LNPEP	Q9UIQ6	1025 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	AGO1	Q9UL18	857 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	TRIM33	Q9UPN9	1127 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SORCS3	Q9UPU3	1222 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	RUVBL2	Q9Y230	463 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	VPS9D1	Q9Y2B5	631 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	SH3BP1	Q9Y3L3	701 aa		10.84	□□□□□ -0.67
SPIDR-222	ENST00000524006	GOLGA8Q	A0A0J9YX86	632 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	GOLGA8O	A6NCC3	632 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	C2orf81	A6NN90	581 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	GOLGA8N	F8WBI6	632 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CHUK	O15111	745 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	TBL1X	O60907	577 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	WFS1	O76024	890 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ABLIM3	O94929	683 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	KLHL2	O95198	593 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	PEX11B	O96011	259 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	EPO	P01588	193 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CKM	P06732	381 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ENO1	P06733	434 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	F7	P08709	466 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	KRT16	P08779	473 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ACR	P10323	421 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	MYL4	P12829	197 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CSF2RA	P15509	400 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	EPHB1	P54762	984 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	RPS24	P62847	133 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	PPIG	Q13427	754 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	1e-6	■■□□□ 12.9
SPIDR-222	ENST00000524006	RIPK1	Q13546	671 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	DLG2	Q15700	870 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	DNAL1	Q4LDG9	190 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	AFTPH	Q6ULP2	937 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	GLT6D1	Q7Z4J2	308 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	PTAR1	Q7Z6K3	402 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CLEC14A	Q86T13	490 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ALYREF	Q86V81	257 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	RNF168	Q8IYW5	571 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	KIRREL3	Q8IZU9	778 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CRIPAK	Q8N1N5	446 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	TDRD5	Q8NAT2	981 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	TOP1MT	Q969P6	601 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	2e-7	■■■■■ 62.8
SPIDR-222	ENST00000524006	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF778	Q96MU6	729 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	MGME1	Q9BQP7	344 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZBED2	Q9BTP6	218 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	VN1R3	Q9BXE9	311 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	PBX4	Q9BYU1	374 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	MRPL46	Q9H2W6	279 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	NOD2	Q9HC29	1040 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	PRDM6	Q9NQX0	595 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	CPSF2	Q9P2I0	782 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	XPR1	Q9UBH6	696 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	VPS28	Q9UK41	221 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF510	Q9Y2H8	683 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	ASB3	Q9Y575	518 aa		10.83	□□□□□ -0.68
SPIDR-222	ENST00000524006	TRAV19	A0A0A6YYK7	116 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	C2orf71	A6NGG8	1288 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	GOLGA8CP	A6NN73	597 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	SLCO1B7	G3V0H7	640 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	INSIG1	O15503	277 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	MGRN1	O60291	552 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	SMIM24	O75264	130 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	C1R	P00736	705 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	LMNA	P02545	664 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	AHSG	P02765	367 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ADH1A	P07327	375 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	SERPINA6	P08185	405 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	MMP2	P08253	660 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	RBP1	P09455	135 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	LTA4H	P09960	611 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	HMGA1	P17096	107 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	OGN	P20774	298 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	HOXD9	P28356	352 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARCN1	P48444	511 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	SCNN1B	P51168	640 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	RHOA	P61586	193 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	WDR5	P61964	334 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	DEFB103A	P81534	67 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	SLC20A2	Q08357	652 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PRKAA1	Q13131	559 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	FAM91A1	Q658Y4	838 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms