RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TPRG1LQ5T0D9 272 aa19.27■□□□□ 0.68
FBXO28-205ENST00000523990 MARC1Q5VT66 337 aa19.27■□□□□ 0.68
FBXO28-205ENST00000523990 TEX26Q8N6G2 289 aa19.27■□□□□ 0.68
FBXO28-205ENST00000523990 EID2Q8N6I1 236 aa19.27■□□□□ 0.68
FBXO28-205ENST00000523990 C1QTNF7Q9BXJ2 289 aa19.27■□□□□ 0.68
FBXO28-205ENST00000523990 LRRD1A4D1F6 860 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 C3orf70A6NLC5 250 aaPredicted RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 HTRA2O43464 458 aaPredicted RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 MAGEA1P43355 309 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 LIG3P49916 1009 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 HADHBP55084 474 aaKnown RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 SEMG2Q02383 582 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 GBE1Q04446 702 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 RALGDSQ12967 914 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 PDE1CQ14123 709 aaPredicted RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 AGERQ15109 404 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 RALGPS1Q5JS13 557 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 PARGQ86W56 976 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 VSIG1Q86XK7 387 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 CCDC170Q8IYT3 715 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 SLC25A45Q8N413 288 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 MAML1Q92585 1016 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 CNDP2Q96KP4 475 aaKnown RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 RNF157Q96PX1 679 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 TMEM121BQ9BXQ6 578 aaPredicted RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 NOD2Q9HC29 1040 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 SCUBE2Q9NQ36 999 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 MBNL1Q9NR56 388 aaKnown RBP19.26■□□□□ 0.67
FBXO28-205ENST00000523990 IGF2RP11717 2491 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 ZFHX4Q86UP3 3567 aa19.26■□□□□ 0.67
FBXO28-205ENST00000523990 FAM221BA6H8Z2 402 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 GOLGA8CPA6NN73 597 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 ENC1O14682 589 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 PIAS2O75928 621 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 FECHP22830 423 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 DGKAP23743 735 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 SLC1A1P43005 524 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 POLR2LP62875 67 aaKnown RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 SLC10A2Q12908 348 aaPredicted RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 IRF4Q15306 451 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 IFI16Q16666 785 aaKnown RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 LRRC38Q5VT99 294 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 TIGD7Q6NT04 549 aaPredicted RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 DPPA4Q7L190 304 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 PLD5Q8N7P1 536 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 FATE1Q969F0 183 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 HDAC11Q96DB2 347 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 TSGA13Q96PP4 275 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 PANX2Q96RD6 677 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 NT5MQ9NPB1 228 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 UCKL1Q9NWZ5 548 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 DNAJC28Q9NX36 388 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 DTLQ9NZJ0 730 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 HYOU1Q9Y4L1 999 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 PCDHGC4Q9Y5F7 938 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 CFAP69A5D8W1 941 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 MATN3O15232 486 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 LDOC1O95751 146 aaPredicted RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 NME1P15531 152 aaKnown RBP19.25■□□□□ 0.67
FBXO28-205ENST00000523990 CCNCP24863 283 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 TRAF2Q12933 501 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 LRRC14Q15048 493 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 ZNF542PQ5EBM4 170 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 SLC9A4Q6AI14 798 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 ALG1LQ6GMV1 187 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 GATA6Q92908 595 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 MSRB2Q9Y3D2 182 aa19.25■□□□□ 0.67
FBXO28-205ENST00000523990 MYLKQ15746 1914 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 GOLGA4Q13439 2230 aaKnown RBP19.24■□□□□ 0.67
FBXO28-205ENST00000523990 BPTFQ12830 3046 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 A0A1W2PQ67 120 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 CSF2P04141 144 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 KRT1P04264 644 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 ELFN1P0C7U0 828 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 GIMD1P0DJR0 217 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 MX2P20592 715 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 COMTP21964 271 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 CYLC1P35663 651 aaPredicted RBP19.24■□□□□ 0.67
FBXO28-205ENST00000523990 HNRNPKP61978 463 aaKnown RBP eCLIP19.24■□□□□ 0.67
FBXO28-205ENST00000523990 YPEL5P62699 121 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 DNAJC3Q13217 504 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 WSCD2Q2TBF2 565 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 LIPIQ6XZB0 460 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 RHOT1Q8IXI2 618 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 PAF1Q8N7H5 531 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 PDCD6IPQ8WUM4 868 aaKnown RBP19.24■□□□□ 0.67
FBXO28-205ENST00000523990 POLR1EQ9GZS1 481 aaKnown RBP19.24■□□□□ 0.67
FBXO28-205ENST00000523990 KLF15Q9UIH9 416 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 TFR2Q9UP52 801 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 PCDHA13Q9Y5I0 950 aa19.24■□□□□ 0.67
FBXO28-205ENST00000523990 SOWAHDA6NJG2 315 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 C1QTNF9BB2RNN3 333 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 TOR1BO14657 336 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 SPOPO43791 374 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 CPP00450 1065 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 C1QTNF9P0C862 333 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 GM2AP17900 193 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 ACADVLP49748 655 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 THOP1P52888 689 aa19.23■□□□□ 0.67
FBXO28-205ENST00000523990 EIF2B5Q13144 721 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms