RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MAN1A1P33908 653 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 OR1D5P58170 312 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 RNASE9P60153 205 aaKnown RBP9.4□□□□□ -0.9
PTPN12-216ENST00000523952 ARF5P84085 180 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 GCNT1Q02742 428 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 GNA12Q03113 381 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 DEUP1Q05D60 604 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 ELP6Q0PNE2 266 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 CDC20Q12834 499 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 INPP5AQ14642 412 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 CFAP58Q5T655 872 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 SPECC1LQ69YQ0 1117 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 C11orf57Q6ZUT1 292 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-216ENST00000523952 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 AGBL5Q8NDL9 886 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 OR2AP1Q8NGE2 309 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 ISG20Q96AZ6 181 aaKnown RBP9.4□□□□□ -0.9
PTPN12-216ENST00000523952 SLC45A3Q96JT2 553 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 CCDC74BQ96LY2 380 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 RBM15Q96T37 977 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■□□□□ 8.3
PTPN12-216ENST00000523952 NCAPGQ9BPX3 1015 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 ZYG11BQ9C0D3 744 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 PRDM8Q9NQV8 689 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 PIGVQ9NUD9 493 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 RRN3Q9NYV6 651 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 TP53TG5Q9Y2B4 290 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 COQ6Q9Y2Z9 468 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 SNX10Q9Y5X0 201 aa9.4□□□□□ -0.9
PTPN12-216ENST00000523952 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 DUX1O43812 170 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 IGSF6O95976 241 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 F9P00740 461 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 FGF3P11487 239 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 TCN2P20062 427 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 MAP4P27816 1152 aaKnown RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 CD97P48960 835 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 RAB15P59190 212 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 STIM1Q13586 685 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 TRA2AQ13595 282 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■□□ 14.9
PTPN12-216ENST00000523952 CLPPQ16740 277 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 ARHGAP44Q17R89 818 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 MYLK3Q32MK0 819 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 TMPRSS9Q7Z410 1059 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 IRF2BP1Q8IU81 584 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 PASD1Q8IV76 773 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 NLGN4XQ8N0W4 816 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 NLGN4YQ8NFZ3 816 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 PDXPQ96GD0 296 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 GDAP1L1Q96MZ0 367 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 TEFMQ96QE5 360 aaKnown RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 CPXM1Q96SM3 734 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 DDA1Q9BW61 102 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 SUDS3Q9H7L9 328 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 UBE2TQ9NPD8 197 aaPredicted RBP9.39□□□□□ -0.91
PTPN12-216ENST00000523952 ARHGEF38Q9NXL2 777 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.912e-28■■■■■ 40.3
PTPN12-216ENST00000523952 RCOR1Q9UKL0 485 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 PCDHGA3Q9Y5H0 932 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 LRBAP50851 2863 aa9.39□□□□□ -0.91
PTPN12-216ENST00000523952 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 IGHV5-10-1A0A0J9YXX1 117 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 AREL1O15033 823 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 P4HA2O15460 535 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 ZMPSTE24O75844 475 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 GNLYP22749 145 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 PRCPP42785 496 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 UQCRFS1P47985 274 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 CXCR3P49682 368 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 SUOXP51687 545 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 NDUFA8P51970 172 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 SLC6A3Q01959 620 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 MTM1Q13496 603 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPN12-216ENST00000523952 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
PTPN12-216ENST00000523952 ATXN7L2Q5T6C5 722 aaPredicted RBP9.38□□□□□ -0.91
PTPN12-216ENST00000523952 RWDD4Q6NW29 188 aaKnown RBP9.38□□□□□ -0.91
PTPN12-216ENST00000523952 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 OGFOD3Q6PK18 319 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 OR56A4Q8NGH8 313 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 AHCYL2Q96HN2 611 aaKnown RBP9.38□□□□□ -0.91
PTPN12-216ENST00000523952 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 DPYSL5Q9BPU6 564 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 NUDT22Q9BRQ3 303 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 PDCL3Q9H2J4 239 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 CYP4F12Q9HCS2 524 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 TMEM51Q9NW97 253 aa9.38□□□□□ -0.91
PTPN12-216ENST00000523952 KCTD3Q9Y597 815 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms